Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0370 ATGGAGACTTGGTCATCGGTGGGTGCAGTGGTTGAAGAGATAATGGGGATTCATAAATCTTTACCTGCTAGACCAGGGATTGATGAAGTTGAAGCTGCAAAGGCTTTGATAATCAATGTTGAGAGAGAAGACCAAGTGAGATTTGAATCCATAGCCAAGCAAAGTAAGGGTCCTGAAGTGGCAGAAGAGTTGTTCATATTGTTGCAAGAGATGCAGAAGAATTTTGTTTATTTTCAGAGCAATGAGCAAAAGAGGGAGGCTTTGAAACTGCTTGATCTTGAAAATATTCATTCTCTGTTTGATGAATTGATTCAGAGAGCTTCCAACTGTGTTTCTTCCACTCCCTCCAATTCCAATTCGAGTTCTCGAAAAGCCAGTTACTCCAATGGTTCCCCTTCCACAGTTTCGACCAGTTTGTCGAACAATTCAATTTCTGCTTCATCTTCTATGGGTGGTTTTTATAAGATGCAACCTCCTGCTGCTGCTTCTTCCAGTTTGCTCCATGCAGAGAAAGAACCGGTGAACAGTTTAGAATTATTCACTAGAGATGACAGTTATGTCATGAAGACCAAGTCCACATTCTACTCCAACAGTTATGGAATTCAACCCAGTAACCTCTCCAAACCGAAGATATTGGATTCATCACTAAAACTGGCAACTACTGCAGGTCAAGGTGGTGATAAGTTGAGTTTGATAAAACTTGCTAGCTTAATTGAAGTTTCTGCAAAGAAAGGTGCTCCTGATCTCAAACTTCAGAATAAGTTGATGGACCAAGTTGATTGGCTGCCTGACTCAATAGGGAAATTATCAAGTTTGGTTACCCTTGATTTATCCGAGAATCGGATTATGGCCTTACCTTCCACAATCGGAGGCCTTTCATCCTTGACCAGATTGGACTTGCATTCCAATGGGATCACAGAGCTCCCTGATTCTATTGGAAATTTGCTTAGTCTAGTCTATCTAGATCTGCGTGGAAACCAGCTTTCATCTCTGCCTGCTTCTTTTGGCAGATTGGTACGTCTTGAGGAGCTTGATTTGAGTTCAAATCAGATTTCAGTGCTTTCTGACACTATTGGGTCACTTGTTGGCCTAAAAGTATTGAGTGTGGAGACAAATGATATTGAAGAAATTCCACATTCTATTGGTAATTGTTCTTCCCTTAGAGAGCTCCGCGCTGACTATAATCGACTTAAAGCCCTACCAGAAGCTGTAGGGAAGATTCAGAGCCTGGAGATTCTGTCATTGCGTTACAATAACATTAAACAGCTTCCTACCACAATGTCATCTCTAATAAACCTGAAGGAACTTAATGTGAGTTTTAATGAGCTTGAGTCGCTGCCTGAGAGCTTATGCTTTGCTACCTCTCTTGTTAAGTTGGTCATAGGAAATAATTTTGCTGACATGAGATCATTACCAAGATCCATTGGGAACCTTGAAATGCTTGAGGAATTGGATATCAGCAATAATCAGATTTATGTTCTTCCTGACTCATTTAGGATGCTCAGTCGACTACGTGTCCTACGAGTGGAAGAGAATCCTCTTGAAGTTCCACCAAGACATATAGCTGCAAAGGGAGCGCAGGCTGTTGTACAATACATGGCTGAACTTGTGGAGAAGAGGGAGAAGAAGGATGTTAAACCTCAGCAACTTAAGAAGAAAAAGAGTTGGATACAGATCCGCTTCTTTTCAAAGAAAGTGTGA 1701 0.4121 METWSSVGAVVEEIMGIHKSLPARPGIDEVEAAKALIINVEREDQVRFESIAKQSKGPEVAEELFILLQEMQKNFVYFQSNEQKREALKLLDLENIHSLFDELIQRASNCVSSTPSNSNSSSRKASYSNGSPSTVSTSLSNNSISASSSMGGFYKMQPPAAASSSLLHAEKEPVNSLELFTRDDSYVMKTKSTFYSNSYGIQPSNLSKPKILDSSLKLATTAGQGGDKLSLIKLASLIEVSAKKGAPDLKLQNKLMDQVDWLPDSIGKLSSLVTLDLSENRIMALPSTIGGLSSLTRLDLHSNGITELPDSIGNLLSLVYLDLRGNQLSSLPASFGRLVRLEELDLSSNQISVLSDTIGSLVGLKVLSVETNDIEEIPHSIGNCSSLRELRADYNRLKALPEAVGKIQSLEILSLRYNNIKQLPTTMSSLINLKELNVSFNELESLPESLCFATSLVKLVIGNNFADMRSLPRSIGNLEMLEELDISNNQIYVLPDSFRMLSRLRVLRVEENPLEVPPRHIAAKGAQAVVQYMAELVEKREKKDVKPQQLKKKKSWIQIRFFSKKV 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0370 566 SMART LRR_typ_2 478 500 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 361 384 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 430 453 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 407 429 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 338 360 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 385 406 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 501 524 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 269 291 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 315 337 IPR003591 -
Lal16g0370 566 SMART LRR_typ_2 292 314 IPR003591 -
Lal16g0370 566 Pfam Leucine rich repeat 294 351 IPR001611 GO:0005515
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 317 338 IPR001611 GO:0005515
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 294 315 IPR001611 GO:0005515
Lal16g0370 566 PANTHER LEUCINE-RICH REPEAT-CONTAINING 3 564 - -
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 409 430 IPR001611 GO:0005515
Lal16g0370 566 SMART LRR_sd22_2 478 498 - -
Lal16g0370 566 SMART LRR_sd22_2 315 333 - -
Lal16g0370 566 SMART LRR_sd22_2 269 294 - -
Lal16g0370 566 SMART LRR_sd22_2 361 379 - -
Lal16g0370 566 SMART LRR_sd22_2 407 435 - -
Lal16g0370 566 SMART LRR_sd22_2 338 359 - -
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 340 361 IPR001611 GO:0005515
Lal16g0370 566 PRINTS Leucine-rich repeat signature 272 285 - -
Lal16g0370 566 PRINTS Leucine-rich repeat signature 338 351 - -
Lal16g0370 566 MobiDBLite consensus disorder prediction 111 140 - -
Lal16g0370 566 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Lal16g0370 566 SMART LRR_bac_2 338 357 - -
Lal16g0370 566 SMART LRR_bac_2 292 311 - -
Lal16g0370 566 SMART LRR_bac_2 315 334 - -
Lal16g0370 566 SMART LRR_bac_2 269 288 - -
Lal16g0370 566 SMART LRR_bac_2 384 403 - -
Lal16g0370 566 SMART LRR_bac_2 407 426 - -
Lal16g0370 566 SMART LRR_bac_2 478 497 - -
Lal16g0370 566 SMART LRR_bac_2 430 449 - -
Lal16g0370 566 SMART LRR_bac_2 361 380 - -
Lal16g0370 566 SUPERFAMILY L domain-like 253 518 - -
Lal16g0370 566 Gene3D Ribonuclease Inhibitor 240 538 IPR032675 -
Lal16g0370 566 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 4 3 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0370 Lal-Chr16 2226917 2230317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0370 253 517 Receptor kinase-like Gene Family AT3G28890 29.520 1.58e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0370 - - gmx:100787496 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0370 16 2226917 2230317 Lal16g0370 16 2226917 2230317 ECH
Lal16g0370 16 2226917 2230317 Lal15g0307 15 2052334 2055402 LSH
Lal16g0370 16 2226917 2230317 Lal23g1186 23 13217663 13220954 LSH