Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0307 ATGGAGATTTGGTCATCGGTGGATGCAGTGGTGGAAGAGATAATGAGGATTCATAAATCTTTGCCTGCTAGACCAGGGATTGATGAAGTTGAAGCTGCAAAAGCTTTGATGATAAATGTTGAGAGAGAAGATCAAGTGAGATTTGAATCCATAGCAAAACAAAGTAAGGGTGTTGAAGTGCCAGAAGAGTTGTTCATGCTGCTGCAAGAGATGCAGAAGAATTTGGTTTATTTTCAGAGCAATGAGCAAAAGTGGGAGGCTGAGAAACTGCTTGATCTTGAAAACATTCACTCTCTATTTGATGAATTGATTCAGAGAGCTTCCAAGTGTATTTCTTCCCCTCCCTCCAATTCAAATTTGAATTCACCAAAAACCAGTTACTCCAGTGGTTCCCCTACAACGGTTTCTAAGAATTCTGTTTCTGCTCCGGCTTCTCGAGGTAGTTTTGGTAAAGTGCCACCTCCTTCTAGTGCTGCTGCTTCTTCCGGTTTGTTCAACGCAGAGAAAGAACCAGTGAAAAATTCAGAATTGTTCACACGAGATGACAGTTATGTTAAGCAGACCAAGTCCACATTATACTCCAGGGGTTATGGAATTCAACCCAGTAACCAATCAAAACCACAGATATTGGATTCATCACTGAAATCCATATCTACTGAAGGTCAAGTTGGTGATAAGTTGAGTTTGATCAAACTTGCTAGCTTAATTGAAGTTTCTGCAAAGAAAGGTACTAGTGATCTCAAACTCCAGAACAAATTGACGGACCAAGTTGATTGGCTGCCTGATTCGATAGGGAAGTTGTCGAGTTTGGTTACCCTTGATTTATCCGAGAATCGGATTATGACCCTACCTTCCACAATTGGAGGCCTTTCATCCTTGACCAGATTTGATTTGCATGCCAATAGGATCACGGAACTCCCTGATTCTATTGGGAATATACTTAGTCTAGTCTATCTAGATCTGCGGGGGAATCAGTTATCATCTCTGCCTACTTCTTTTGGCAGATTGGTACGCCTTGAGGAACTTGATTTGAGTTCAAATCAGCTTTCAGTGCTTCCTGACACTATAGGGTCACTTGTTAGCCTAAAAATATTGAATGTGGAGACAAATAATATTGAAGAAATTCCACATTCTATTGGTAGTTGTTCTTCCCTTAGAGAGCTTCATGCTGACTATAATCGGCTTAAAGCCCTACCAGAAGCTGTAGGGAAGATTCAGAGCCTGGAGATTTTATCCATGCGGTACAATAACATTAAACAACTACCGACGACAATGTCATCTCTAATAAACCTGAAGGAACTTGATGTGAGTTTCAATGAACTTGAGTCAGTGCCTGAGAGCTTATGTTTTGTTACATCTCTTGTCAAGTTGGTCATAGGAAACAATTTCGCTGACATGCGATCATTACCAAGATCCATCGGGAACCTTGAAATGCTTGAGGAATTGGATATTAGCAATAATCAAATACGTGTTCTTCCTGACTCATTTAGGATGCTCACTCGACTACGTGTCCTACAAGTGGAAGAGAATCCTCTTGAAGTTCCACCAAGACATATAGCTGAAAACGGAGCACAGGCTGTTGTCCAATACATGGCTGAGTTGGTGAAGGAGAAGAAGAATGTTAAACCTCAGCCACCAAAGCATAAAAAGAGTTGGGCTCAGATCTGCTTTTCAAAACTCTATCAAAAGAAAGGGTGTTGGAGGAGTTGA 1710 0.4099 MEIWSSVDAVVEEIMRIHKSLPARPGIDEVEAAKALMINVEREDQVRFESIAKQSKGVEVPEELFMLLQEMQKNLVYFQSNEQKWEAEKLLDLENIHSLFDELIQRASKCISSPPSNSNLNSPKTSYSSGSPTTVSKNSVSAPASRGSFGKVPPPSSAAASSGLFNAEKEPVKNSELFTRDDSYVKQTKSTLYSRGYGIQPSNQSKPQILDSSLKSISTEGQVGDKLSLIKLASLIEVSAKKGTSDLKLQNKLTDQVDWLPDSIGKLSSLVTLDLSENRIMTLPSTIGGLSSLTRFDLHANRITELPDSIGNILSLVYLDLRGNQLSSLPTSFGRLVRLEELDLSSNQLSVLPDTIGSLVSLKILNVETNNIEEIPHSIGSCSSLRELHADYNRLKALPEAVGKIQSLEILSMRYNNIKQLPTTMSSLINLKELDVSFNELESVPESLCFVTSLVKLVIGNNFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFRMLTRLRVLQVEENPLEVPPRHIAENGAQAVVQYMAELVKEKKNVKPQPPKHKKSWAQICFSKLYQKKGCWRS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0307 569 ProSiteProfiles Leucine-rich repeat profile. 478 499 IPR001611 GO:0005515
Lal15g0307 569 MobiDBLite consensus disorder prediction 112 145 - -
Lal15g0307 569 PRINTS Leucine-rich repeat signature 270 283 - -
Lal15g0307 569 PRINTS Leucine-rich repeat signature 336 349 - -
Lal15g0307 569 MobiDBLite consensus disorder prediction 112 165 - -
Lal15g0307 569 Gene3D Ribonuclease Inhibitor 328 416 IPR032675 -
Lal15g0307 569 Gene3D Ribonuclease Inhibitor 417 534 IPR032675 -
Lal15g0307 569 ProSiteProfiles Leucine-rich repeat profile. 338 359 IPR001611 GO:0005515
Lal15g0307 569 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 4 4 563 - -
Lal15g0307 569 SMART LRR_bac_2 313 332 - -
Lal15g0307 569 SMART LRR_bac_2 428 447 - -
Lal15g0307 569 SMART LRR_bac_2 476 495 - -
Lal15g0307 569 SMART LRR_bac_2 382 401 - -
Lal15g0307 569 SMART LRR_bac_2 267 286 - -
Lal15g0307 569 SMART LRR_bac_2 359 378 - -
Lal15g0307 569 SMART LRR_bac_2 336 355 - -
Lal15g0307 569 SMART LRR_bac_2 290 309 - -
Lal15g0307 569 SMART LRR_bac_2 405 424 - -
Lal15g0307 569 Pfam Leucine rich repeat 292 349 IPR001611 GO:0005515
Lal15g0307 569 Pfam Leucine rich repeat 453 512 IPR001611 GO:0005515
Lal15g0307 569 Gene3D Ribonuclease Inhibitor 237 327 IPR032675 -
Lal15g0307 569 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 563 - -
Lal15g0307 569 ProSiteProfiles Leucine-rich repeat profile. 430 451 IPR001611 GO:0005515
Lal15g0307 569 SUPERFAMILY L domain-like 251 516 - -
Lal15g0307 569 SMART LRR_sd22_2 336 369 - -
Lal15g0307 569 SMART LRR_sd22_2 476 496 - -
Lal15g0307 569 SMART LRR_sd22_2 428 446 - -
Lal15g0307 569 SMART LRR_sd22_2 267 292 - -
Lal15g0307 569 ProSiteProfiles Leucine-rich repeat profile. 315 336 IPR001611 GO:0005515
Lal15g0307 569 SMART LRR_typ_2 405 427 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 476 498 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 383 404 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 359 382 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 313 335 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 336 358 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 499 522 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 290 312 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 428 451 IPR003591 -
Lal15g0307 569 SMART LRR_typ_2 267 289 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0307 Lal-Chr15 2052334 2055402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0307 250 512 Receptor kinase-like Gene Family AT3G28890 29.897 3.77e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0307 - - lang:109332572 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0307 15 2052334 2055402 Lal15g0307 15 2052334 2055402 ECH
Lal16g0370 16 2226917 2230317 Lal15g0307 15 2052334 2055402 LSH
Lal15g0307 15 2052334 2055402 Lal23g1186 23 13217663 13220954 LSH