Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1340 ATGCGAGTGAAGGAAATGCACCCTTTGTGTTGCATCTCCCTTGAGGGTTCAGGGATCGGAAGCAACTCGCCGGAGCCAGACACGGCGGCTCTGTCAAGAACAAGGAGCCTTCCGGCGAGTTTCGCGGCAGGTGGATCTGTTGTCGTTAATGGTGGTGGATCGGAAATGACGGTGGCCGGAGTTCTCTACAAGTGGACTAATTACGGCAAAGGATGGAGATCCCGGTGGTTCCTCCTCCGCAATGGCGTCCTCTCTTACGCTAAGATCCGGAAGCCGGAAAACCTTAACCTCTTCTCTCCCGTCGACGATGTTCGCCTCATCGGAGAAGTCTCCGCCAACCTCTTAGCCAGGTTGGACTCCTCCGCCGCCACCATGCGCCGTAAAAACCATAAACCACCGTTATCTTCCGGCATTGTCCATCTCAAGATATCATCATTTAGAGAGAGCAAATCAGATGATAGGAAGTTCTATATATTTACAGCAACAAAGACTCTTCATCTAAGAACTGATTCAAGGAAAGACCGTGTAGAGTGGATTCAAGCTTTGGTTTCTACTCGTGGCTTGTATCAACTTCGACCACACAGTGATCATATCTCACTTGCACCAAATCATATATTTGTGTCAACTGAGAGGCTTAAGAAACACTTGCTTGAAGAGGGTACCAATGAGAATCTTGTAAAAGAGTGTGAGCAAATCATGCTCAGTGAGTTCTCAAATTTACAAGGGCAACTTAGAATCTTATGTCAAGAAAGAACAAATTTGCTTGATACAATAAGACAGTTGGAGGCAGCAAATATTGATGCTGAGGCATCTGTTATACATGACAGTGGATATCAATTAACCAAGAATGTATTATCAAGGCTAGGACGAGGAAAATTTAGTGAATGCAGTACAACTGAATCATCGGACGATATTGATAAACATGAGCTAGAGGAAGTGTCAGATGAAGATGAACATTCATATTATGATACTAAAGAAGATTTTACTGATTCTGGTTTTGGATGTGGTTCAATAGAAGCCAAGTCTGGGGAATCTAACACACAATGCACTAATATGGAGAACATTCATCTTGAGAATGCGATCGATAATTATCGATATCCTATGATAACAAGGCGAAGAAAGCTTTCCGATCCCGTTGAGAAAGAGAAAGGTGTTAGTCTTTGGTCGATGATCAAAGACAATGTGGGTAAAGATCTCACTCGAGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCATCCCTTCAAAAATGTTTTGAGGACTTGGAGTACTCTTATCTTCTGGATCGAGCTTATGAGTATGGAAAATCAGGAAATAGTCTCCTTCGGGCGCTAAATGTTGCAGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGACATTGTAAACCCTTTAACCCATTGTTAGGGGAAACTTATGAAGCTGATTATCCTGACAAAGGACTTCGATTCTTTTCTGAGAAGGTCAGTCACCATCCAACAGTAGTTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGTAGGTCAATTCAGCTTGAACCAGTGGGAGTTCTGACCCTAGAATTTGATGATGGTGAAATATTCCAGTGGAGCAAGGTCACAACAACAATATATAATCTCATCCTTGGAAAAATATATTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTCAACATTCATGCAGACTCAAGTTTAAAGAGCAATCCATTCTTGACCGAAATCCTCACCAGGTGCAAGGGTTTGTTGAAGATGATATGGGACAAAAAGTTGCCACATTATTTGGCAAGTGGGATAACAGCTTGTATTATGTTAATGGTGATGTCAATGTGAAGCCAAAAGATTTCACTTTATCAGATGCACCATTGTTGTGGAAAAGGACTAAGCCACCTATTAATCTCACTAGGTACAATTTGACATCATTTGCCATCACACTGAATGAACTTACCCCAGGATTGAAGGAGAAGCTCCCACCCACAGATTCCAGGTTGAGACCAGATCAGAGGCACCTAGAGAATGGGGAATATGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGAGACAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGAAACCTAGGTGGTTCCACCAAGGAGATGAAAATGGAACTTTTCAATATATTGGTGGATATTGGGAAGCAAGATCTCAAGGGAGATGGAATGAATGCCCAAATATATTTGGTGAATATAATGAAGGCAATGTTGATACTTTAGATGCATCTTGA 2298 0.4212 MRVKEMHPLCCISLEGSGIGSNSPEPDTAALSRTRSLPASFAAGGSVVVNGGGSEMTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRKPENLNLFSPVDDVRLIGEVSANLLARLDSSAATMRRKNHKPPLSSGIVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVEWIQALVSTRGLYQLRPHSDHISLAPNHIFVSTERLKKHLLEEGTNENLVKECEQIMLSEFSNLQGQLRILCQERTNLLDTIRQLEAANIDAEASVIHDSGYQLTKNVLSRLGRGKFSECSTTESSDDIDKHELEEVSDEDEHSYYDTKEDFTDSGFGCGSIEAKSGESNTQCTNMENIHLENAIDNYRYPMITRRRKLSDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLEPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQHSCRLKFKEQSILDRNPHQVQGFVEDDMGQKVATLFGKWDNSLYYVNGDVNVKPKDFTLSDAPLLWKRTKPPINLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWKPRWFHQGDENGTFQYIGGYWEARSQGRWNECPNIFGEYNEGNVDTLDAS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1340 765 Coils Coil 683 712 - -
Lal15g1340 765 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 756 - -
Lal15g1340 765 SMART PH_update 56 189 IPR001849 -
Lal15g1340 765 SUPERFAMILY Oxysterol-binding protein-like 381 759 IPR037239 -
Lal15g1340 765 ProSiteProfiles PH domain profile. 55 187 IPR001849 -
Lal15g1340 765 Gene3D - 472 644 - -
Lal15g1340 765 Gene3D - 682 744 - -
Lal15g1340 765 Coils Coil 244 264 - -
Lal15g1340 765 Gene3D - 53 187 IPR011993 -
Lal15g1340 765 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 756 IPR000648 GO:0008289
Lal15g1340 765 Pfam Oxysterol-binding protein 386 739 IPR000648 GO:0008289
Lal15g1340 765 Pfam Pleckstrin homology domain 60 182 - -
Lal15g1340 765 SUPERFAMILY PH domain-like 55 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1340 Lal-Chr15 15452491 15463794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1340 K20456 - gmx:100793692 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1340 15 15452491 15463794 Lal15g1340 15 15452491 15463794 ECH
Lal15g1340 15 15452491 15463794 Lal16g1288 16 9104550 9115009 LSH
Lal15g0266 15 1810997 1818920 Lal15g1340 15 15452491 15463794 PCT