Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0266 ATGCACACACTGTGCTGCATCTCTCTGGAGAATCCCGGAATTGGCAACCATTCGCCGGAACTAGAGGCAGCGCCGCTTTCGCGGACAATGAGCGTCCCAACGGGCATATCTTACAGCAATGCCGGCCAAGTATCGGAGGCTACGGTTGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGTTGGTTCCTTTTGCGAAATGGCGTCCTCTCTTACGCCAAGATCCGCCACCCGGAGAATCTCAACCTTCTCTCACCCGCCCACGACCTCCGCCTTATCGGCCATATTTCTTCCCACCGCCTCGCTAGGATCAACGCCGCCGCCGCCACGCGACGCAAAACTCCTGGTGTAGTTCATCTGAAGATTTCGTCATTTAGAGAGAGCAAATCAGATGATCGACGTTTCTATATATTTACAGCGATGAAGACTTTTCATCTGAGAACTGATTCAAGAAAAGATAGGGTGGAATGGATACAAGCACTATTATCAACCCGTGCGGTTTATCCACTTCAAACTCTCAGTGATAATCTCACTGTTGCACCCACTGGAATAATAAATGTATCAACAGAGCGACTTAAGAAACGCTTGCTTGAAGAGGGTACCACCGACAACGTTGTACACGAGTGTCAACAAATCATGCTCTCTGAGTGTCAACAAATACATGGACAACTTGAAATTCTTTGTCAAGAACGTTCTACTTTGCTTGATACAATTATGCACCTTGAGGCAGCTAAAATTGAACCTGTGGTCTCTGCAATACATGATGGTGAATACTCATTAACAAAGAATAAACTTTCAAATCTAGGACGTGGAAAGTATAGTGAATGCAGTACAACTGAATCATCCGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATGTCGTATTATGATACTAGAGAGTATTTTACTGAGCCTGGTTTTCGATACGGGTTGACAAATGATATGGATCAAGTGGATATGGAAAACATTGAGCTTGAGAAGGTGGTCTATAATTATAGGCACCCTCGGATAGCAAGAAGAATAATGCTCCCAGATCCTGTTGAGAAAGAGAAGGGTGTAAGTCTTTGGTCAATGATCAAAGACAATGTGGGAAAAGATCTCACACGAGTTTGTCTTCCGGTATACTTTAATGAGCCCATATCATCCCTTCAAAAATGTTGTGAGGACTTGGAGTACTCTCATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACAATCTTGTTCGAGCACTGAATGTTGCTGCCTTCGCAATTTCGGGATATGCATCATCTGAAGGTCGTCATTGTAAACCCTTCAATCCCTTATTAGGAGAAACCTATGAAGCTGATTATCCTGAGAAAGGGATTCGCTTCTTTTCTGAGAAGGTGAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTCGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTCTGGGGAAGGTCAATTCAGCTTGAGCCAGCTGGAGTTCTGACCCTAGAGTTCGATGATGGCGAAATATTTCAGTGGAGCAAGGTCACCACAAAAATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGGAACATGGATATTCGAGGTAATCGCCAATACTCATGCAGAATCAAGTTCAAAGAGCAGGCGATTCTTGATCGAAATCCCCACCAGGTGCATGGATTTGTTGAAGATGTAACGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGTATGTATTATGTTAATGGCAATGTGAATGTTAAGCCAAAAGATTTCACCTTATCAAACGCATCATTGTTGTGGAAAAGGACCTTGCCACCCACTAATGTCACTCGGTACAATTTGACATCTTTTGCCATCACACTGAATGAGCTCACTCTAGGACTAAAGGAGAAGCTCCCACCCACAGATTCCAGGCTCAGACCAGACCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATTTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGGACAATACAAGAAAGTGGGTGGAAGCCGAGGTGGTTCCAAAGAGAAGGTGAAAATGAAACATTCCGTTATGTTGGCGGTTATTGGGAAGCAAGAGAGCAAGGAAAATGGGACAAATGCTCAAATATATTTGGTGAGTTTAATGAAGACATTGTCGATCGTTCAGGTGCATCTTAA 2235 0.4407 MHTLCCISLENPGIGNHSPELEAAPLSRTMSVPTGISYSNAGQVSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRHPENLNLLSPAHDLRLIGHISSHRLARINAAAATRRKTPGVVHLKISSFRESKSDDRRFYIFTAMKTFHLRTDSRKDRVEWIQALLSTRAVYPLQTLSDNLTVAPTGIINVSTERLKKRLLEEGTTDNVVHECQQIMLSECQQIHGQLEILCQERSTLLDTIMHLEAAKIEPVVSAIHDGEYSLTKNKLSNLGRGKYSECSTTESSDDIEKQEMEEVSDEDEMSYYDTREYFTEPGFRYGLTNDMDQVDMENIELEKVVYNYRHPRIARRIMLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSHLLDQAYEYGKSGNNLVRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLEPAGVLTLEFDDGEIFQWSKVTTKIYNLILGKIYCDHHGNMDIRGNRQYSCRIKFKEQAILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGNVNVKPKDFTLSNASLLWKRTLPPTNVTRYNLTSFAITLNELTLGLKEKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSRTIQESGWKPRWFQREGENETFRYVGGYWEAREQGKWDKCSNIFGEFNEDIVDRSGAS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0266 744 SUPERFAMILY PH domain-like 47 168 - -
Lal15g0266 744 MobiDBLite consensus disorder prediction 276 301 - -
Lal15g0266 744 ProSiteProfiles PH domain profile. 46 171 IPR001849 -
Lal15g0266 744 Gene3D - 43 172 IPR011993 -
Lal15g0266 744 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 2 735 - -
Lal15g0266 744 Gene3D - 451 622 - -
Lal15g0266 744 Coils Coil 662 691 - -
Lal15g0266 744 Pfam Oxysterol-binding protein 365 719 IPR000648 GO:0008289
Lal15g0266 744 Pfam Pleckstrin homology domain 51 166 - -
Lal15g0266 744 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 735 IPR000648 GO:0008289
Lal15g0266 744 SUPERFAMILY Oxysterol-binding protein-like 360 738 IPR037239 -
Lal15g0266 744 Gene3D - 661 735 - -
Lal15g0266 744 SMART PH_update 47 173 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0266 Lal-Chr15 1810997 1818920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0266 K20456 - gmx:100819924 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0266 15 1810997 1818920 Lal15g0266 15 1810997 1818920 ECH
Lal15g0266 15 1810997 1818920 Lal15g1340 15 15452491 15463794 PCT
Lal15g0266 15 1810997 1818920 Lal16g1288 16 9104550 9115009 PCT