Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0905 ATGGGTCTCTTCTTTTCTAGAAGTTTGCCTTTTAAATGTTTCTTTCCTTTCATTTTCCCTAAGAAAATTTCTGAGGATTTTTTACCTAGACAACTTGAGAGCATGATGTGCTTGGTGGCACGCACTGGAAGGCATTTGCAACGTTATGATGGTGATTGTCGCCAAGTTGTGGGATGCATTCCATACAGATATAGGATGAAGGAAAACCAAAACATGGAACTAGAGGTTCTTGTTATAAGTGCTCAAAAGGGTAATGGAATGCAGTTCCCTAAGGGAGGTTGGGAGATTGATGAATCCATGGAACAAGCTGCTTTAAGGGAGACCATAGAAGAAGCTGGGGTTGTTGGCAGCATTGAAAGTAAATTGGGCAAATGGTTGTATAAGAGCAAACGCCAAGACAGTCTGCATGAGGGATATATGTTCTCTTTGCTTGTCAAGAAGCAATTAGAGAATTGGCCAGAGAAGAACATCCGAAATCGAAGATGGATGAGTGTTGCTGAAGCAAAAGAAGTTTGTCCATATACTTGGATGAAGGAGGCTTTAGATGTATTGGTTAGTAAACAAAACCTCAATCCCAGCCAAAAAGGAGAGAGATATTAG 600 0.4067 MGLFFSRSLPFKCFFPFIFPKKISEDFLPRQLESMMCLVARTGRHLQRYDGDCRQVVGCIPYRYRMKENQNMELEVLVISAQKGNGMQFPKGGWEIDESMEQAALRETIEEAGVVGSIESKLGKWLYKSKRQDSLHEGYMFSLLVKKQLENWPEKNIRNRRWMSVAEAKEVCPYTWMKEALDVLVSKQNLNPSQKGERY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0905 199 ProSiteProfiles Nudix hydrolase domain profile. 52 185 IPR000086 -
Lal15g0905 199 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 23 189 - -
Lal15g0905 199 ProSitePatterns Nudix box signature. 92 113 IPR020084 GO:0016787
Lal15g0905 199 Pfam NUDIX domain 72 170 IPR000086 -
Lal15g0905 199 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 40 187 - -
Lal15g0905 199 CDD Nudix_Hydrolase_9 55 178 - -
Lal15g0905 199 SUPERFAMILY Nudix 42 184 IPR015797 -
Lal15g0905 199 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 23 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0905 Lal-Chr15 6861743 6863661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0905 K07766 - gmx:100800531 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0926 16 6134968 6136711 Lal15g0905 15 6861743 6863661 LSH
Lal15g0905 15 6861743 6863661 Lal10g0951 10 16843794 16845687 PCT
Lal10g0951 10 16843794 16845687 Lal15g0905 15 6861743 6863661 PCT