Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0951 ATGGGTCTTTTCCTTTCTAGGAACCTTACTTCTAACTTCTTATACCCTTTCCTTTTTTCTAAGCAATTGGAGAACATTATGTGTTTGGTTTCACCTCGTACTGGAAGACATTTACAACGTTATCATAATGGGTGTCGCCAAGTTGTCGGATGCATCCCTTATAGATACAAGAGCAAGGGAATTCAGGACAAGGAAATAGAGGTTCTTGTGATTAGTGCTCAGAAAGGTCAAGGAATGCAGTTCCCAAAGGGTGGTTGGGAGATTGATGAATCAATGGAACAAGCTGCTTTAAGAGAGACAATAGAGGAAGCTGGGGTTATTGGCAATGTTGAGAGTAAATTAGGTAAATGGGTTTATAAGAGCAAAAGCCAGGCCATAATGCATGAGGGATATATGTTCCCTTTACTTGTTAATAAGCAGTTGGATAATTGGCCAGAAATGAACTTCAGAAAACGGATTTGGATGACTGTAGCTGAAGCAAAAGAAATATGCCCTCATGCTTGGATGAAGGAAGCTTTAGATGTATTGGTTAATAGACAAACTCAACCGCATCCAAAGCTATAA 564 0.3954 MGLFLSRNLTSNFLYPFLFSKQLENIMCLVSPRTGRHLQRYHNGCRQVVGCIPYRYKSKGIQDKEIEVLVISAQKGQGMQFPKGGWEIDESMEQAALRETIEEAGVIGNVESKLGKWVYKSKSQAIMHEGYMFPLLVNKQLDNWPEMNFRKRIWMTVAEAKEICPHAWMKEALDVLVNRQTQPHPKL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0951 187 SUPERFAMILY Nudix 35 178 IPR015797 -
Lal10g0951 187 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 17 184 - -
Lal10g0951 187 ProSiteProfiles Nudix hydrolase domain profile. 44 177 IPR000086 -
Lal10g0951 187 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 17 184 - -
Lal10g0951 187 ProSitePatterns Nudix box signature. 84 105 IPR020084 GO:0016787
Lal10g0951 187 CDD Nudix_Hydrolase_9 47 170 - -
Lal10g0951 187 Pfam NUDIX domain 63 172 IPR000086 -
Lal10g0951 187 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 32 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0951 Lal-Chr10 16843794 16845687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0951 K07766 - gmx:100777839 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0926 16 6134968 6136711 Lal10g0951 10 16843794 16845687 PCT
Lal15g0905 15 6861743 6863661 Lal10g0951 10 16843794 16845687 PCT
Lal10g0951 10 16843794 16845687 Lal16g0926 16 6134968 6136711 PCT
Lal10g0951 10 16843794 16845687 Lal15g0905 15 6861743 6863661 PCT