Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1689 ATGCGATCAGGAGGCTGTGCGTTGCAGCAGACCCTCACAGCTGAGGCTGCTTCAATCTTGAAGCACTCTCTGGGTTTGGCTCGTAGGAGGGGCCATGCACAGGTCACACCTTTGCATGTAGCAGCAACATTGCTAAGCCTAAGAGCAAGTTCCTTCACAAGGGGTTGTCTCAAATCTCAGCCTCACCAAACTTCACACCCTCTTCAATGCAAAGCCCTTGAGCTTTGTTTCAATGTTGCCCTCCACAGGCTTCCAACAACACCACCTCCTTTGATCCACACTTCTCATCAGCCTTCTTTTTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGGGGTTCCATTGAGCAACAGCAACAGCAGCCACTTCTCACTATCAGGGTTGAGCTTGAACAACTCATCATATCCATTCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAAGCTGGATTTTCTAGCACTGATGTTAAGAACAACATAGAGGACTCTTCTTCATCACCTTCTTCTGTTTTTCAGTGTTACAATACTTCTGGTGGTGTGTTTTCTTCTCCTTGTTCACCTTCTGCTAGTGAGAGCAACCCTCTCCGTCGTTTCAGGCCGAATCATTTCTTGTCTGCTTACACTTCTGAGTTCAACAACCAGGTTCTATTTTCTCCACCAAAGAAAGCACCATTGTATCCTTATCATACCACTGGTGCAGCAGCATCTTCTACGAAAGATGATATTAAGGTGGTTTTTGATATCTTCTTGAGGAAGAAGAAAAAGAATACTGTGATAGTTAGTGACTCAGTTTCATTGACTGAAGGCCTGGTGGGAGAGGTAATGAAAAGGTTTCAAAGATCAGAGGTACCTGATGAGTTGAAGTCAACACATTTTATAAAGTTTCAGTTTTCACCAATTTCTTTGAGGTACATGAAAAGGGATGAGGTTGAAATGAAAGTCCAAGAGCTGAAAAGGAAGGTGAACTCTGTTGCATCAGGAGGAGGAGGAGGAGGGAGTGCCATTTTTTATATTGGAGACCTGAAATGGATAATGGAAGGACATTTCAGTAAAAAAGATCAAGAAGGGTCCCTGGATGGTGAAGTTTCTGGTTATAACCCAGTTGATCATTTGGTTTCAGAAATTGGAAAGTTATTCTGTGACTTTGGAACCTCAAACACTAAGGTGTGGCTCATGGCTACTGCAAGTTATCAAACATACATGAGGTGTCAAATTAAGCAACCCTCTCTTGAGTCTCAGTGGGCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGCTTTGAGTCTCCATGCTCCCAGTGTCCTTGATTCAAAGATGACCATCTCCCAGAACCCATATCATATGCTGGAAAAAAAGCTCTTCAATAACAAGGAGCAGCAGGATAATCTCTATTTCTGTGAAGAATGTGCCTCCAATTATGAAAAGGAAGCTCAATTTCTCAAAACAGACCAGAAAAAAATACTTCCTTTCTGGCTTCAATGTCATGACATGGAAGCAAATCAGAAGGATGAGCTCACCAAGTTGAAAACAAAATGGAATAGATTGTGCCACTGTCTCCACCAAAGCAAACAGCATCTGAACAAAGCCAACAGTAATTACAATTGGAATGGAAAGATTTACCCCTATAACTCATCAAGCTCTATATCCTTTGCCAACAATACCTATAGCTCAAGTCGTGTACCCTGTTTCCAGCGTCAAAAATCATGCATTGAGTTCAATTTCAGTGACAAAAAGCCAACAGCAGAGCCAGTCTTGGATTCCGTTGAGGGCATGCCAGAAGGTAAAGAAGTAAGGACTACTCTTGCTCTTGGAAATGGTGGTTCAGGTGAGACGGTGGGGGATATAACTAATAGAACACTCCGAAGAGCTCATATTTGTAAACTATTGCAGGAGAATGTGGCATGGCATTCTGAGACTGTTCCTTCAATAGCTGAGGTCTTGCTTGACTCACAATCAGCAAAGCAAAGTAACATTACTTGGTTACTGATGCAAGGTAATGACTCCATTGGAAAAAGAAGGATGGCACTTGCAGTTGCAGAATCAGTTTTTAGCTCGGTTGATAAGTTCCTTCACTTAGACATGCTAAGGAAAGAAACTTCAATAGCTCCATTCTCTGACTTGCTCGCAGGAGCTTTGAAAATCCATCAACAGCTTGTTGTGTTTATAGAAAATATTGACTTTGTTGATGCCCAATTCAAGAAATTACTTGCTGGTGGATTTGAAACAGGAAAATTTGGAAATTTAACAAGGAATTCAGATAAGTTAGGCCAATTGATATTCATATTATCAAATGGTGGTTCCACAAGAAGTGATGAGCATAACCATGATTCTGTGATCAAGTTGTTATTGCAGGTGAGTGAAACCAAACCAAACTTAGAGGCAGCTTGTTTAGGCCTCAAACGCCAGACTGAACTGGATTTCTTTTCCAAGATCAAGAGACCAAAATTTGAAGAGAAGGAAGAGCCATTGTTGGTTTCTGAACAAGGTGGCCTAAAGAAAGACTTTTCAAGACGGTCAAGTTTTAACACCCTTGATCTGAATTTGAAGGCTGATGAAGAGGATGACAAAAAAGGTGACAGTAGCCCAAATTCAAGTGATTTAACTAGAGAAACTATGGCTGATTCATTAAACTCAAACTGTTTTCTTGACTTAATTGAGAACCGGTTCGAGTTTAACACAAGTCAAGCTAAGGACAAAGAGATGGCAGAGCTGTTCTTATCTAAGATCAAAGCATCCTTCGACGATGTTTATGGCAAGCAATGTTTGGTTAATTTTAGTGTAGATGAGAGGGTGATTGAGGAAATGTATGTAGGGTGTGGTTATTTTACTAACAGCTTATTTGAGAAATGGCTCAGAGACATTTTTCAAAATAGCTTGCAGACAGTTAGCTATGGAGGGAAAGAGAGTATAGTTGTTAGGCTTAGTTGGGGTGGTAAAGGAGATAGGAAATTGGATAATGGGTTTATGAGTTCAACTCTACCAAAGGGTATCCAAGTTAACTACTTAATGGAATGA 3036 0.413 MRSGGCALQQTLTAEAASILKHSLGLARRRGHAQVTPLHVAATLLSLRASSFTRGCLKSQPHQTSHPLQCKALELCFNVALHRLPTTPPPLIHTSHQPSFSNALIAALKRAQAHQRRGSIEQQQQQPLLTIRVELEQLIISILDDPSVSRVMREAGFSSTDVKNNIEDSSSSPSSVFQCYNTSGGVFSSPCSPSASESNPLRRFRPNHFLSAYTSEFNNQVLFSPPKKAPLYPYHTTGAAASSTKDDIKVVFDIFLRKKKKNTVIVSDSVSLTEGLVGEVMKRFQRSEVPDELKSTHFIKFQFSPISLRYMKRDEVEMKVQELKRKVNSVASGGGGGGSAIFYIGDLKWIMEGHFSKKDQEGSLDGEVSGYNPVDHLVSEIGKLFCDFGTSNTKVWLMATASYQTYMRCQIKQPSLESQWALQAVPVPSGGLALSLHAPSVLDSKMTISQNPYHMLEKKLFNNKEQQDNLYFCEECASNYEKEAQFLKTDQKKILPFWLQCHDMEANQKDELTKLKTKWNRLCHCLHQSKQHLNKANSNYNWNGKIYPYNSSSSISFANNTYSSSRVPCFQRQKSCIEFNFSDKKPTAEPVLDSVEGMPEGKEVRTTLALGNGGSGETVGDITNRTLRRAHICKLLQENVAWHSETVPSIAEVLLDSQSAKQSNITWLLMQGNDSIGKRRMALAVAESVFSSVDKFLHLDMLRKETSIAPFSDLLAGALKIHQQLVVFIENIDFVDAQFKKLLAGGFETGKFGNLTRNSDKLGQLIFILSNGGSTRSDEHNHDSVIKLLLQVSETKPNLEAACLGLKRQTELDFFSKIKRPKFEEKEEPLLVSEQGGLKKDFSRRSSFNTLDLNLKADEEDDKKGDSSPNSSDLTRETMADSLNSNCFLDLIENRFEFNTSQAKDKEMAELFLSKIKASFDDVYGKQCLVNFSVDERVIEEMYVGCGYFTNSLFEKWLRDIFQNSLQTVSYGGKESIVVRLSWGGKGDRKLDNGFMSSTLPKGIQVNYLME 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1689 1011 SUPERFAMILY Double Clp-N motif 12 167 IPR036628 -
Lal14g1689 1011 ProSiteProfiles Clp repeat (R) domain profile. 8 172 IPR004176 -
Lal14g1689 1011 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 984 - -
Lal14g1689 1011 PANTHER PROTEIN SMAX1-LIKE 5 1 984 - -
Lal14g1689 1011 Gene3D - 9 172 IPR036628 -
Lal14g1689 1011 Gene3D - 617 821 IPR027417 -
Lal14g1689 1011 Pfam Clp amino terminal domain, pathogenicity island component 133 169 IPR004176 -
Lal14g1689 1011 Pfam Clp amino terminal domain, pathogenicity island component 26 45 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1689 Lal-Chr14 17056790 17065631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1689 - - gmx:100816045 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1689 14 17056790 17065631 Lal14g1689 14 17056790 17065631 ECH
Lal14g1689 14 17056790 17065631 Lal7g1094 7 16914412 16918432 LSH
Lal14g1689 14 17056790 17065631 Lal19g1238 19 15634445 15643783 LSH
Lal14g1689 14 17056790 17065631 Lal17g1556 17 16997908 17001634 PCT
Lal17g1556 17 16997908 17001634 Lal14g1689 14 17056790 17065631 PCT