Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1676 ATGGCAATAAACTTTGTAGTATCAAAAGTTATAATTGTTCTATGGCTAACCATCATGATGGTCATAGGAGCACAATCATTAGAGCCATGGTCACCACTCCAAGCTCCTAAAGAACTAGTCAATAAGTTTAGTCGTGACCCTTTGCTCATATCACTAGCCTCAACCGATTATGGACACATAATTCACGAAAACCCATTTGCAATTTTTGCTCCATCATCTATCAATGACATCTCAAATTTAATAAAATTCTCAAATTCTCTTCCCTTTCCATTCACTGTAGCGGCCAGAGGACAAGCTCACTCCCTTCAAGGACAATCCATGACTAATAATGGAATTGTAGTGAACATGACTGAGCTAAACCGGTTAAAAAATGGGGTTGGGATAGTAGTATCAGAAGAGAAGAGTTCTTTAGGTTATTATGTTGATGTGGGTGGTGAACAAATATGGATTGATGTGTTGCATGCAACACTTGAACGTGGACTTACACCACTCTCTTGGACTGATTACTTGTTCTTATCGGTGGGTGGAACTCTCTCTAATGCTGGAATTAGTGGCCAATCTTTTCGATTTGGTCCTCAGATTTCCAATGTTCATGAGTTGGATGTTGTTACAGGGAAAGGAGACCTGGTGACCTGTTCTAAAGAGAAAAACTCTGAGTTATTTTACGCCGTTCTTGGAGGTTTAGGTCAATTTGGGATTATAACCAGAGCAAGAATAACTCTAGGACCTGCACCCACAAGGGCAAGACTTAACGAAAGTAATAATGCACCCGATTATTTAGAAGGTTTGCTTCTGCTAAATCAGCAGCCATTGGACATTTCCTTTTATCCAGAATTTGATCAGCCTCGTGTAACTTCCCTGGTAACCCAATTTGGAATATTATACGTCATAGAGCTTGTGAAGTACTATGACAATAATACTCAAGAACACATCGACGAGGATGTTAAACTTTTGGTGAAGGACTTGAAGTTTGTTCCTACGTTTATGTTCCAAAAAGATTTGACCTACGAGGAGTTTCTAAACAGAGTTCATTCTGATGAGCTTAATCTTAGGTCAGAGGGACTTTGGGATGTCCCTCATCCTTGGTTGAATCTCTTCGTTCCAAGATCACGAATTTCAGATTTCGATGAAGGTGTGTTCAAGGGTATCATACTTAAGCAAAATATTACTGCAGGAGTTGTGCTAGTTTACCCCATAAATCGATCCAAGTGGAATGATAAGATGTCAGCGGTTACACCCAATGAAGATGTTTTCTACGTCGTGTCTCTTCTGCATACAGCTGCGACACTTGATCAATTGGAGTCATTTAAGGCTCAAAACCAACAAATATTACAGTTCTGTGAGGATGCTAGTATTGGAATCAAGCAATATCTTCCTCAAAACAAAACAAGAGAACAATGGGTACAGCACTTTGGCCCCAAATGGAAATCTTTTCAACAAAGAAAAGTTCAATTCGATCCCAACAGATTATTGTCCCCTGGACAAGGGATTTTCAATTAA 1500 0.3947 MAINFVVSKVIIVLWLTIMMVIGAQSLEPWSPLQAPKELVNKFSRDPLLISLASTDYGHIIHENPFAIFAPSSINDISNLIKFSNSLPFPFTVAARGQAHSLQGQSMTNNGIVVNMTELNRLKNGVGIVVSEEKSSLGYYVDVGGEQIWIDVLHATLERGLTPLSWTDYLFLSVGGTLSNAGISGQSFRFGPQISNVHELDVVTGKGDLVTCSKEKNSELFYAVLGGLGQFGIITRARITLGPAPTRARLNESNNAPDYLEGLLLLNQQPLDISFYPEFDQPRVTSLVTQFGILYVIELVKYYDNNTQEHIDEDVKLLVKDLKFVPTFMFQKDLTYEEFLNRVHSDELNLRSEGLWDVPHPWLNLFVPRSRISDFDEGVFKGIILKQNITAGVVLVYPINRSKWNDKMSAVTPNEDVFYVVSLLHTAATLDQLESFKAQNQQILQFCEDASIGIKQYLPQNKTREQWVQHFGPKWKSFQQRKVQFDPNRLLSPGQGIFN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1676 499 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 253 498 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal14g1676 499 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 254 499 - -
Lal14g1676 499 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 9 248 - -
Lal14g1676 499 Gene3D - 247 457 IPR016170 -
Lal14g1676 499 Pfam FAD binding domain 67 213 IPR006094 GO:0050660
Lal14g1676 499 SUPERFAMILY FAD-binding/transporter-associated domain-like 43 243 IPR036318 GO:0050660
Lal14g1676 499 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 499 IPR016164 GO:0003824|GO:0050660
Lal14g1676 499 Gene3D - 51 498 IPR016167 -
Lal14g1676 499 PANTHER GULONOLACTONE OXIDASE 254 499 - -
Lal14g1676 499 PANTHER GULONOLACTONE OXIDASE 9 248 - -
Lal14g1676 499 Gene3D - 116 246 IPR016169 -
Lal14g1676 499 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 244 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1676 Lal-Chr14 16970920 16975613 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1676 K00279 - gmx:100808553 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1676 14 16970920 16975613 Lal17g1532 17 16736074 16740687 PCT
Lal14g1676 14 16970920 16975613 Lal21g1208 21 15014706 15020729 PCT
Lal14g1676 14 16970920 16975613 Lal4g1547 4 19634876 19639527 PCT
Lal17g1532 17 16736074 16740687 Lal14g1676 14 16970920 16975613 PCT
Lal21g1208 21 15014706 15020729 Lal14g1676 14 16970920 16975613 PCT
Lal4g1547 4 19634876 19639527 Lal14g1676 14 16970920 16975613 PCT