Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1496 ATGGAGTCTAGTTTAGTGATCAAGGTCAAATATGAGGACACCCTCAGGCGCTTTAGTGCCTGTGTCACTGAGAATAATCAACTGGATCTTGACATGGTTGGGCTAAGGACCAAGATATGTTCTCTTTTCAATTTCACTGCTGATGCAAATGTAGTGCTGAGATATACCGATGAAGATGGCGACTTGGTGACCCTTGTCGATGATGATGATTTGCATGATATCATGAGGCAGAGGCTACCATTCTTGAGAATTGATGTACACATGAGCAATGACAGTGGTGGTAAACCAAGTTCTAGTTCTAGTCGAAGTGCTTACTCGTTAAGATCTCCTCATGTCACTGACCCATTTCAGAGTGGAAATGTTGCTGTTGCTGATGTTTGGAAGTCTGTGCAAGAGCCATTAAACGACACTCTTTCTAATTTATGCTTGGTTTCAAAAGCTGTATCTTCTGCAAATCCAGTACTTGCTAACCTTGCTGATACCATTTCCAAAGTGGGAAAACCTATTCTAAATTCTCATATCCATCCTAGTGTTGCTACTAGTCCAAGCACAAAAAAGGGTACTCCTGGAGAACATGCCATTCCTAAAGCAAAAGGTCAACAGTCCACATATGTCAACACAACTTTTACTGATTTCATTTCCAGAAGTGCAAAACCCCCTTTTAATTCTCTTTACCAACCTCATGTTGCTTCCGGCCCAAGCATAAACAATGGTGCTCTTGGAGAACATGTCACTCCTGAAGCAAGAGGTCTTCCACAGCCTAGATATGTCGACTCAACTTCTGGAAGTCCTTTTCATGCTTTCGCTGATTGCGTTTCGAAAATTGGAAAACCTGTTGGAAATTCTTATTATCAATTGCCTCATGATGTGGCTGGTGTTCCTGGAGAACATGTCACTCCTGAAGAAAGAGGTCAACAGTCTACATATGTGGACAAAAGTTCCAATGGAATTCAACCTGTGGAGACTGGAAATGTAATTAGAGATTCAATGGAAAGAGTTGCTCCTGTTGATCTCAATATCCCCCCATTTGATCTCTATTCATCTCAGCCAGCAAATGTGAATATTACACCTCTTTCACCAGCAGTCCCTGATGTTGATGCCAAAAATGGTACAGCGCCTACCAATGATAGTTTTGCTCAAAAGGGTAAAAATAGTGGGACTCGTGAGGGTAAAAATAGTTGGATCTCCTCAAGTTCTGCTGCTCCTAACAATGGCTCAAGCTGGACTAGTTCTAATGCTTACATTAAGACTCCAACTTATCTTCGTGATTCAGCTGCACTCTTGGGTAAATCTAGTGGAACCACAAGCTCCACAGCTCCTGCTAACAGCTCATCTTCGACTTGTTCTACTGCTTTTGCTAAGCCTCCAATTTATACTGGTGATTTGGGCGCACCTTCTGAAAGGACCCTTTATATTAATACAAGTGCTCATGAAATATCAAATGGCATGATCCATAGGGGTGTCCAATGTGATGGTTGTGGTGTCTATCCAATAGTTGGATCTCGCTTTAATTCCAAAGTGAAAGAAAACTTTGACCTCTGCAGCATTTGCTTCAACACAATGGGTACTGTGGCTGATTATAATAGAATTGATCGCTTTCATCCACTATATTTATCAGCGTTAGCACACACTTTGAAGCTTCTAAGGCCTAAGGTAGATAGTCGGTTCATTTTGGATGTCAATGTTATAGATGGCACAATGATGGCTCCATCTACTGCATTTACTAAGATCTGGCGGATCCGTAACAATGGCACTTTAGTGTGGCCCATTGGAACCCAACTTGTTTGGATCGGAGGGGATAATTTTAGTGACTCTCATTTAGTTGACTTACAGGTTCCCGAGGAAGGTATACCTGTAGATAAGGAACTTGACATTGCAGTTGACTTCATAGCTCCTCAGTTACCCGGTCGATACATATCATATTGGAGGATGGCATCTCCATCTGGACAGAAATTTGGACAACGTGTTTGGGTACTTATTCAGGTTGATGCTTCTATCAAGGAGTCATTTTATAATAGATCTCAAGGTCTGAACATGAATATTCCCCTTGATGTCAGTGGCTCGAAAGGGTCCCAGCTTATAGATATCAATGTTCAACCCACTGAGGATCATATTCCCAATGCTCATACTGAACCTGTTAATGAAATGGTAGATAATCAATTGATGATGCAAGAGCTGTTAAACGATTTAAACGATGCCATAGATGATGCTGCTGCATCAGCCCCTGCAACTTCGGCTGCTGCTGCTGCATCAGCCCCTGCAACTTTGGCTGCTGCTGCTGCATCAGCCCCTGCAACTTTGGCTGCTGCTGCTGCATCAGCCCCTGCAACTTTGGCTGCTGCTGCTGCATCAGCTCCTACTATTGCACTTTCGTCTGTTTCATATCCTAATATCCATTTGTTTGAAACAACCCCTGCTGTTTCCTCTAGCCAGCAATCTGCAGCTGTGGATGTACCACCATCAACTTTGGAGGTTGGTGTAAATAATTCCGTTGAAGAGACTCTTCTTAAAGAGCTTGAGGAGATGGGTTTTAAGCAGGTTGATTTGAACATAGAGATCCTGAGGATGAATGAGTACAATCTGGAGCAGTCAGTTGATGATCTCTGTGGTGTTTATGAGTGGGACCCTATCCTTGAAGAGTTACATGAAATGGGATTCCGTGACAATGACATGAACAAGAAGCTGCTAATGAAGAACAGTGGAAGCATCAAACGTGTTGTTATGGATTTGTTGAATGGGGAGTAG 2745 0.4259 MESSLVIKVKYEDTLRRFSACVTENNQLDLDMVGLRTKICSLFNFTADANVVLRYTDEDGDLVTLVDDDDLHDIMRQRLPFLRIDVHMSNDSGGKPSSSSSRSAYSLRSPHVTDPFQSGNVAVADVWKSVQEPLNDTLSNLCLVSKAVSSANPVLANLADTISKVGKPILNSHIHPSVATSPSTKKGTPGEHAIPKAKGQQSTYVNTTFTDFISRSAKPPFNSLYQPHVASGPSINNGALGEHVTPEARGLPQPRYVDSTSGSPFHAFADCVSKIGKPVGNSYYQLPHDVAGVPGEHVTPEERGQQSTYVDKSSNGIQPVETGNVIRDSMERVAPVDLNIPPFDLYSSQPANVNITPLSPAVPDVDAKNGTAPTNDSFAQKGKNSGTREGKNSWISSSSAAPNNGSSWTSSNAYIKTPTYLRDSAALLGKSSGTTSSTAPANSSSSTCSTAFAKPPIYTGDLGAPSERTLYINTSAHEISNGMIHRGVQCDGCGVYPIVGSRFNSKVKENFDLCSICFNTMGTVADYNRIDRFHPLYLSALAHTLKLLRPKVDSRFILDVNVIDGTMMAPSTAFTKIWRIRNNGTLVWPIGTQLVWIGGDNFSDSHLVDLQVPEEGIPVDKELDIAVDFIAPQLPGRYISYWRMASPSGQKFGQRVWVLIQVDASIKESFYNRSQGLNMNIPLDVSGSKGSQLIDINVQPTEDHIPNAHTEPVNEMVDNQLMMQELLNDLNDAIDDAAASAPATSAAAAASAPATLAAAAASAPATLAAAAASAPATLAAAAASAPTIALSSVSYPNIHLFETTPAVSSSQQSAAVDVPPSTLEVGVNNSVEETLLKELEEMGFKQVDLNIEILRMNEYNLEQSVDDLCGVYEWDPILEELHEMGFRDNDMNKKLLMKNSGSIKRVVMDLLNGE 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1496 914 Pfam Ig-like domain from next to BRCA1 gene 561 662 IPR032350 -
Lal14g1496 914 SUPERFAMILY CAD & PB1 domains 4 77 - -
Lal14g1496 914 MobiDBLite consensus disorder prediction 370 408 - -
Lal14g1496 914 CDD UBA_NBR1 873 911 - -
Lal14g1496 914 MobiDBLite consensus disorder prediction 364 408 - -
Lal14g1496 914 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 482 734 - -
Lal14g1496 914 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 783 914 - -
Lal14g1496 914 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 168 - -
Lal14g1496 914 MobiDBLite consensus disorder prediction 90 110 - -
Lal14g1496 914 MobiDBLite consensus disorder prediction 301 319 - -
Lal14g1496 914 PANTHER PROTEIN JOKA2 482 734 - -
Lal14g1496 914 PANTHER PROTEIN JOKA2 783 914 - -
Lal14g1496 914 PANTHER PROTEIN JOKA2 1 168 - -
Lal14g1496 914 MobiDBLite consensus disorder prediction 295 319 - -
Lal14g1496 914 Gene3D - 479 537 IPR043145 -
Lal14g1496 914 CDD NBR1_like 550 663 IPR032350 -
Lal14g1496 914 SMART PB1_new 4 89 IPR000270 GO:0005515
Lal14g1496 914 MobiDBLite consensus disorder prediction 173 201 - -
Lal14g1496 914 Pfam PB1 domain 6 77 IPR000270 GO:0005515
Lal14g1496 914 ProSiteProfiles PB1 domain profile. 4 89 IPR000270 GO:0005515
Lal14g1496 914 SUPERFAMILY UBA-like 873 913 IPR009060 GO:0005515
Lal14g1496 914 SMART zz_5 484 529 IPR000433 GO:0008270
Lal14g1496 914 SUPERFAMILY RING/U-box 471 537 - -
Lal14g1496 914 Gene3D - 873 913 - -
Lal14g1496 914 ProSiteProfiles Zinc finger ZZ-type profile. 485 535 IPR000433 GO:0008270
Lal14g1496 914 Gene3D Immunoglobulins 547 667 IPR013783 -
Lal14g1496 914 Pfam Zinc finger, ZZ type 484 520 IPR000433 GO:0008270
Lal14g1496 914 MobiDBLite consensus disorder prediction 91 110 - -
Lal14g1496 914 Gene3D - 1 88 - -
Lal14g1496 914 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 830 868 IPR015940 -
Lal14g1496 914 Gene3D - 827 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1496 Lal-Chr14 15880133 15885253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1496 K17987 - gmx:100778692 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1496 14 15880133 15885253 Lal14g1496 14 15880133 15885253 ECH
Lal14g1496 14 15880133 15885253 Lal7g0903 7 15528192 15532664 LSH
Lal14g1496 14 15880133 15885253 Lal19g1053 19 14307995 14311168 LSH