Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1418 ATGTCTGGTGCCATAGACATGGACCACGTGGGGTTTTCAAAAGCCAAATCCACGGCGGCTCCGGCTTCCGGCCACGGCAAGAAAACGGGCCTGGTTTCAATGGATCACGTGCTACTTGCATTGCGCGAGACGAAAGAAGAGAGGGATCTTCGAATTCGGAGTTTGTTCAATTTCTTTGATGCTGCAAACAATGGGTACTTGGACTATGCTCAAATTGAAGCAGGGTTATCTGCACTGCAGATACCTCCTGAGTATAAGTATGCTAAGGAACTGTTCAAGGTGTGTGATGCTGACAGAGATGGGAGGATCGATTATGGTGATTTTCGACGATATATGGATGATAAGGAGTTGGAACTTTACCGAATTTTTCAGGCTATTGATGTTGAACACAGTGGCTGCATTCTACCTGAAGAGCTTTGGGATGCACTTGTTAAGGCTGGTTGCTTCTATGCTGCAGGGATTGAAATGGATGAGGAGGAGCTCGCGCGCTTTGTAGAGCATGTTGATAAGGATAATAATGGGATCATTACCTTTGAAGAATGGAGAGATTTTCTGCTACTTTATCCTCATGAAGCAACTATTGAAAATATATATCATCATTGGGAGAGGGTGTGCCTTGTAGACATTGGAGAACAAGCAGTCATTCCTGAAGGCATTAGCAAGCATGTTCACAGGAGCAGATACTTTATTGCTGGCGCGATAGCCGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTCAAGGTAGTTTTACAAGTTCAGACTGAAAGTGCTTCTATTATGTCAGCTGTAATGAAGATATGGAAACAAGATGGCTTATTAGGGTTTTTTCGTGGTAATGGATTAAATGTTGTGAAGGTAGCACCGGAAAGTGCTATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGAGGCTCAAGGGAACAATTCAGCTGATATTGGTACTGCTGGGAGACTATTTGCAGGTGGTATGGCTGGTGCTGTTGCACAGATGGCTATATATCCGATGGATCTTATTAAAACTAGGTTACAGACTTGCGCTTCTGAGGGTGGAAGGGTTCCTAAGCTGAGCAGACTTACAAAGGATATATGGGTTCACGAGGGACCACGGGCTTTCTACAGAGGGCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATGTCAAAGAGATATCTTCTTGACAGCGAACCCGGTCCTCTAGTACAACTGGGATGTGGGACAATCTCAGGAGCTGTTGGAGCTACCTGTGTCTATCCACTGCAGGTTATTCGTACAAGACTGCAGGCACAGTCCCGCAACTCTTCTAATGCTTACAAGGGAATGTCTGATGTGTTTTGGAAAACTCTTAAGGATGAAGGCTTCAGAGGTTTCTACAAGGGACTCGTTCCAAATCTCCTCAAAGTTGTGCCTGCTGCAAGCATTACTTATATGGTCTATGAAAGTATGAAGAAGAATCTAGATCTAGATTAG 1524 0.4416 MSGAIDMDHVGFSKAKSTAAPASGHGKKTGLVSMDHVLLALRETKEERDLRIRSLFNFFDAANNGYLDYAQIEAGLSALQIPPEYKYAKELFKVCDADRDGRIDYGDFRRYMDDKELELYRIFQAIDVEHSGCILPEELWDALVKAGCFYAAGIEMDEEELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATIENIYHHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGAIAGAASRTATAPLDRLKVVLQVQTESASIMSAVMKIWKQDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGEAQGNNSADIGTAGRLFAGGMAGAVAQMAIYPMDLIKTRLQTCASEGGRVPKLSRLTKDIWVHEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDMSKRYLLDSEPGPLVQLGCGTISGAVGATCVYPLQVIRTRLQAQSRNSSNAYKGMSDVFWKTLKDEGFRGFYKGLVPNLLKVVPAASITYMVYESMKKNLDLD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1418 507 Gene3D - 15 118 - -
Lal14g1418 507 Pfam EF-hand domain pair 118 183 IPR002048 GO:0005509
Lal14g1418 507 Pfam EF-hand domain pair 89 114 IPR002048 GO:0005509
Lal14g1418 507 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 306 IPR018108 -
Lal14g1418 507 SMART efh_1 118 146 IPR002048 GO:0005509
Lal14g1418 507 SMART efh_1 51 79 IPR002048 GO:0005509
Lal14g1418 507 SMART efh_1 160 188 IPR002048 GO:0005509
Lal14g1418 507 SMART efh_1 87 115 IPR002048 GO:0005509
Lal14g1418 507 SUPERFAMILY EF-hand 38 222 IPR011992 -
Lal14g1418 507 Gene3D Mitochondrial carrier domain 219 505 IPR023395 -
Lal14g1418 507 ProSiteProfiles EF-hand calcium-binding domain profile. 47 82 IPR002048 GO:0005509
Lal14g1418 507 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Lal14g1418 507 ProSiteProfiles Solute carrier (Solcar) repeat profile. 415 503 IPR018108 -
Lal14g1418 507 ProSitePatterns EF-hand calcium-binding domain. 96 108 IPR018247 -
Lal14g1418 507 Pfam Mitochondrial carrier protein 318 407 IPR018108 -
Lal14g1418 507 Pfam Mitochondrial carrier protein 226 308 IPR018108 -
Lal14g1418 507 Pfam Mitochondrial carrier protein 416 504 IPR018108 -
Lal14g1418 507 ProSitePatterns EF-hand calcium-binding domain. 169 181 IPR018247 -
Lal14g1418 507 PANTHER SOLUTE CARRIER FAMILY 25 60 505 - -
Lal14g1418 507 ProSiteProfiles Solute carrier (Solcar) repeat profile. 318 405 IPR018108 -
Lal14g1418 507 ProSiteProfiles EF-hand calcium-binding domain profile. 156 191 IPR002048 GO:0005509
Lal14g1418 507 SUPERFAMILY Mitochondrial carrier 222 498 IPR023395 -
Lal14g1418 507 Gene3D - 130 211 - -
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 228 241 IPR002067 GO:0055085
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 241 255 IPR002067 GO:0055085
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 281 301 IPR002067 GO:0055085
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 333 351 IPR002067 GO:0055085
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 378 396 IPR002067 GO:0055085
Lal14g1418 507 PRINTS Mitochondrial carrier protein signature 424 446 IPR002067 GO:0055085
Lal14g1418 507 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 60 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1418 Lal-Chr14 15427989 15432961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1418 9 507 EF-hand Containing Proteins AT5G51050 74.257 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1418 K14684 - gmx:100791305 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1418 14 15427989 15432961 Lal14g1418 14 15427989 15432961 ECH
Lal14g1418 14 15427989 15432961 Lal7g0847 7 15057524 15060782 LSH
Lal14g1418 14 15427989 15432961 Lal19g0993 19 13818482 13821032 LSH