Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1406 ATGCTGAAGATCTTAACGATTTATCACTGCATCCTTGGCTTCTTCCTTAAAAAGATGGCAGCAGAGTTAGTCAATGCTGCAACAAGTGAGAAACTTATTGAAATTGATTGGGTGAGAACTATTGCAATCTGTGAATTAGTTGCTCATGATCTTAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGACTGGGTAACAAAAACCCCAATACTCAACTTTCTGCAGTTGTGTTGTTGGAAATGCTGATGAACAATACTGGAGATCATATTCATCAGCAGGTGATTGATACAGGAGTTATTCCCATTCTTATGAAAATTGTGAAGAAAAAGTCGGAATTGCCTTTAAGGGAGCGGATATTTCTCCTACTGAATGCCACACAAACATCACTCGGTGGTGCTTCTGGAAAGTTTCCACAGTACTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGGATCAAGTGCTCCAATCAAATCGTCCTACCGCACAACTTAATAGGACTAATAATGTACTGAATAGGGAACAAGCCTTGCCTAGACAAGGAGGAGTTGCTCAGCATGCACAGTCACAGACCGTTCCTGAATCTAGCATTATTCAAAAGGCTAGTAATGCAATAGAAGTTCTAAAAGAAGTTCTTGATGCTGTTGATGCCCAAAATTCTCAGGGAGCAAGGGGTGAGTTCATCCTCGATCTTGTCGAACAATGCTCACTTCAGAAGCAAAGGGTAATGCATCTGGTAATGACTTCTAGAGATGAGAGGATAGTTTCTCAAGCAATTGAATTGAATGAGCAGCTTCAGAAAGTTATTGCAAGACATGATAACATGCTTTCTGGCAAAGTTACAACAACTACTAATCACTTTAACAATGACGAGGAGGAGGAAGAAGAACTTGAACAGTTATTCCAAAGATTACGCAAAGGAAAGGCGTGTGCAAGGCCTGAAGACGAAGAGACTGAACCTGAGTTTCCTCGCTTGGGTTTGCTTGAAGAGAGACTTAACCGTCCACTGATACGACCAGTCTCTTTGGAGCCGTCTCGACAAACTAATGGTCGTCCTGCACCTGCTGTAATTCTACCTCCAAGTGCAAGGCAGAACCGCGAGCTTGCTCATGTAGCTATTCCACCACCACCGGCAAAGCACATTGAGAGAGAGAGATTTTTTCAGGAAAGTAAGAAGGATGGTGCAACCTTGGCTGGCCACCTTAGAGGTCTCTCCTTGCATAGTCATAATGGCAGCAGTTCTCATAGTGGTAGCTTTGTTTTTAGTGACTGA 1293 0.423 MLKILTIYHCILGFFLKKMAAELVNAATSEKLIEIDWVRTIAICELVAHDLRQARDVVKAIKKRLGNKNPNTQLSAVVLLEMLMNNTGDHIHQQVIDTGVIPILMKIVKKKSELPLRERIFLLLNATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVLQSNRPTAQLNRTNNVLNREQALPRQGGVAQHAQSQTVPESSIIQKASNAIEVLKEVLDAVDAQNSQGARGEFILDLVEQCSLQKQRVMHLVMTSRDERIVSQAIELNEQLQKVIARHDNMLSGKVTTTTNHFNNDEEEEEELEQLFQRLRKGKACARPEDEETEPEFPRLGLLEERLNRPLIRPVSLEPSRQTNGRPAPAVILPPSARQNRELAHVAIPPPPAKHIERERFFQESKKDGATLAGHLRGLSLHSHNGSSSHSGSFVFSD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1406 430 CDD VHS 20 148 - -
Lal14g1406 430 ProSiteProfiles VHS domain profile. 27 156 IPR002014 GO:0035091|GO:0043130
Lal14g1406 430 MobiDBLite consensus disorder prediction 411 430 - -
Lal14g1406 430 SMART VHS_2 20 152 IPR002014 GO:0035091|GO:0043130
Lal14g1406 430 ProSiteProfiles GAT domain profile. 196 284 IPR004152 GO:0035091|GO:0043130
Lal14g1406 430 PANTHER TOM1-LIKE PROTEIN 19 430 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lal14g1406 430 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 19 430 - -
Lal14g1406 430 SUPERFAMILY GAT-like domain 202 286 - -
Lal14g1406 430 SUPERFAMILY ENTH/VHS domain 22 158 IPR008942 -
Lal14g1406 430 Coils Coil 294 314 - -
Lal14g1406 430 Pfam GAT domain 210 285 IPR004152 GO:0035091|GO:0043130
Lal14g1406 430 Gene3D - 16 154 IPR008942 -
Lal14g1406 430 Gene3D - 194 293 IPR038425 -
Lal14g1406 430 Pfam VHS domain 22 129 IPR002014 GO:0035091|GO:0043130
Lal14g1406 430 Coils Coil 205 225 - -
Lal14g1406 430 MobiDBLite consensus disorder prediction 413 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1406 Lal-Chr14 15350919 15356976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1406 - - gmx:100802949 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1406 14 15350919 15356976 Lal14g1406 14 15350919 15356976 ECH
Lal14g1406 14 15350919 15356976 Lal19g0978 19 13702917 13709051 LSH
Lal14g1406 14 15350919 15356976 Lal17g0788 17 5767972 5774492 PCT
Lal17g0788 17 5767972 5774492 Lal14g1406 14 15350919 15356976 PCT