Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1206 ATGGTGAGTGTGCTGCGGGTGCACCTGCCTACTGAAATTCCGATTGTAGGCTGCGAACTCACGCCTTACGTTCTCCTTCGCCGCGCCGATAAAACCGTTACGACCGATGATGTTCCTGAAACCTCCCCTTTAGATGGCCATTTCTTGCGCTACAAGTGGTATCGTGTACAGAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCCACATTGCAGTGCCTAGGTTGTGTTAAGGCCAGATTACCTGTTGCCAAAAGTTACCATTGCACGCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTGTCTTGCATGACCGTGCTGCAAGTGCAGCTAGTGAAAATGGAAATGAGGATGAGGAGTTATATGGGCGTTTTAATAGTTCTGGGTCTGGGATAAGCAATTCCAGCTTATCTGCCTCTGCATCAAGTGCTATCTTAACGAATGGGTCTGCAGCACCTTATCCAGCAGCTATCACACAAAAAAGTGGTGAAATTTGGTATGAAGTTGGACATTCTAAAACTTATACTCCAACAGAAGACGATATTGGCCATGTCCTTAAGTTTGAGTGTGTTGCAGTTGATGCAGAGACAAAATTGCCCGTGGGGCATGTTAATACTATACTAACTTCTCGTGTCATTCCTGCTCCCTCGCCTACACCACGCCAACTAATACCCATTGATGGGATGGGGCATATAGATGCAGATGGGTGTATAACATCTTCTGGGACTTTTACTGTTCTATCATACAATATTTTGTCTGAAGCATATGCCTCAAATGATCTACTCAATTACTGCCCATCATGGGCTCTTTCTTGGACATATCGCAGGCAAAATTTGTTACGAGAAATTGTTGGTTACTCTGCGGACATTATTTGTCTGCAGGAGGTTCAAAGTGACCACTATGATGAATTTTTTTCTCCTGAACTGGACAAACATGGCTATTATGGTCTTTACAAGAGAAAAACTAATGAGATATACAACGGCAACACCAATACAATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTAAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCTTTAACAGATGCTATGATTCCAACTACTCAGAAGAAAACTGCTTTGAATCGACTGGTTAAGGACAATATTGCACTGATTGTGGTTTTGGAAGCAAAAGTTAACAATCAGCCGGTTGATAATGCTGGGAAAAGGCAGCTTCTTTGTGTGGCAAACACACACGTAAATGTTCACCAAGATTTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGGTTGGAAAAAATAGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGTAAGGTAGATTCATCACATCCTGATTTAGCCGTTGACCCACTTAATATCTTGCGCCCTCACAGCAAGTTGGCTCATCAATTGCCACTGGTCAGTGCATACTCTTCATTTGCAAGAACAGCTGGTGTTGGATTTGAGCTGCATAAAAGAAGACTAGATGGTGGAACAAATGAACCTTTATTCACAAATGTTACTAGAGATTTTATTGGCACTCTAGACTACATATTTTACACAGCTGATTCATTGGTTGTGGAGTCATTGTTGGAGTTATTGGATGAGGAGAGGTTGAGGAAGGACACAGCACTTCCTTCCCCTGAATGGTCCTCAGATCATATAGCTCTCTTAGCTGAGTTTCGCTACTGTCGGATCAAGAGACACGCAGTTAAAAAAGCGGAATGA 1815 0.4259 MVSVLRVHLPTEIPIVGCELTPYVLLRRADKTVTTDDVPETSPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKARLPVAKSYHCTPKCFSDAWQHHRVLHDRAASAASENGNEDEELYGRFNSSGSGISNSSLSASASSAILTNGSAAPYPAAITQKSGEIWYEVGHSKTYTPTEDDIGHVLKFECVAVDAETKLPVGHVNTILTSRVIPAPSPTPRQLIPIDGMGHIDADGCITSSGTFTVLSYNILSEAYASNDLLNYCPSWALSWTYRRQNLLREIVGYSADIICLQEVQSDHYDEFFSPELDKHGYYGLYKRKTNEIYNGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNIALIVVLEAKVNNQPVDNAGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDSSHPDLAVDPLNILRPHSKLAHQLPLVSAYSSFARTAGVGFELHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEERLRKDTALPSPEWSSDHIALLAEFRYCRIKRHAVKKAE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1206 604 Gene3D Endonuclease/exonuclease/phosphatase 220 601 IPR036691 -
Lal13g1206 604 Pfam Endonuclease/Exonuclease/phosphatase family 252 583 IPR005135 GO:0003824
Lal13g1206 604 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 596 - -
Lal13g1206 604 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 596 - -
Lal13g1206 604 SUPERFAMILY DNase I-like 244 593 IPR036691 -
Lal13g1206 604 CDD Deadenylase_CCR4 251 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1206 Lal-Chr13 10348496 10358836 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1206 K12603 - gmx:100819402 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1305 11 16700945 16707832 Lal13g1206 13 10348496 10358836 PCT
Lal20g0231 20 1617197 1622507 Lal13g1206 13 10348496 10358836 PCT
Lal13g1206 13 10348496 10358836 Lal11g1305 11 16700945 16707832 PCT
Lal13g1206 13 10348496 10358836 Lal20g0231 20 1617197 1622507 PCT