Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0265 ATGGTGTCCATTGAGGTATGGAACCCAAATGGGAAATACAGAGTTGTTAGCACAAAACCAATGCCTGGAACTCGTTGGATCAATCTTCTTGTCCAACAAGATTGTCGTGTTGAAATATGTACAGAGAAGAAAACTATTCTGTCAGTTGAAGACATCATTGCTTTGATTGGTAATAAGTGCGATGGAGTTATTGGGCAGTTGACTGAAGATTGGGGAGAAGAGTTGTTCTCTGCATTGAGCAGAGCAGGAGGGAAAGCTTTCAGTAACATGGCTGTTGGTTACAATAATGTGGATGTCAATGCTGCAAACAAGTATGCTGTTGCTGTTGGAAATACTCCTGGAGTTCTGACTGAGACAACAGCAGAGTTGGCTGCTTCATTGTCTTTAGCAGCTGCAAGAAGGATAGTTGAGGCAAATGAGTTCATGAGGGCAGGATTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACCTGCTGAAAGGACAAACAGTTGCTTATGCTGAATTCCTGAAAGCAAATGGTGAAGAACCGGTGACTTGGAAAAGGGCAGCATCCATGGATGAGGTCCTCCAAGAGGCAGATCTAATTAGTCTTCATCCTGTCTTGGATAAAACCACCTATTATCTTGTCAACAAGGAAACACTCTCCAAGATGAAGAAGGAAGCAATTCTTATAAACTGCAGTAGAGGGCCAGTTGTTGATGAAGTTGCACTTGTGGAGCATTTAAGACAGAACCCGATGTTTCGCGTAGGCCTCGATGTGTTTGAGGATGAGCCATACATGAAACCTGGGCTTGCAGAGTTGAAGAATGCCATTGTGGTACCTCATATTGCATCTGCTTCCAAGTGGACCCGTGAGGGAATGGCCACGTTAGCAGCTCTAAATGTGCTGGGAAAGATTAAAGGGTACCCAGTTTGGTTTGATGCAAATAAGATGGAACCATTCCTTAACGAGAATGCTCCACCTCCAGCTGCAAGCCCAAGCATTGTTAATGCAAAAGCCTTGGGTTTGCCAGTTTCAAAGTTATAG 1032 0.437 MVSIEVWNPNGKYRVVSTKPMPGTRWINLLVQQDCRVEICTEKKTILSVEDIIALIGNKCDGVIGQLTEDWGEELFSALSRAGGKAFSNMAVGYNNVDVNAANKYAVAVGNTPGVLTETTAELAASLSLAAARRIVEANEFMRAGLYDGWLPHLFVGNLLKGQTVAYAEFLKANGEEPVTWKRAASMDEVLQEADLISLHPVLDKTTYYLVNKETLSKMKKEAILINCSRGPVVDEVALVEHLRQNPMFRVGLDVFEDEPYMKPGLAELKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPVWFDANKMEPFLNENAPPPAASPSIVNAKALGLPVSKL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0265 343 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 303 IPR006139 GO:0016616|GO:0051287
Lal12g0265 343 PANTHER ZGC:136493 25 307 - -
Lal12g0265 343 Gene3D - 15 114 - -
Lal12g0265 343 Gene3D - 279 303 - -
Lal12g0265 343 Gene3D - 115 166 - -
Lal12g0265 343 Gene3D - 183 278 - -
Lal12g0265 343 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 165 279 IPR006140 GO:0051287
Lal12g0265 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 280 IPR036291 -
Lal12g0265 343 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 25 307 - -
Lal12g0265 343 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 13 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0265 Lal-Chr12 1895584 1899052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0265 K15893 - zju:107427284 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0265 12 1895584 1899052 Lal12g0265 12 1895584 1899052 ECH
Lal12g0265 12 1895584 1899052 Lal13g0233 13 1487426 1490694 LSH
Lal12g0265 12 1895584 1899052 Lal24g0198 24 1443548 1452666 LSH