Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1245 ATGGGCTATGATTCTAATGGGCCTAAACCGATCGAATTTAATGGACCTTTAAACCCGGTCGAGTTTAATGGGTTCGTTACTTTTACATCGTCGAGAACCATAGTTAGGGTTTCAAACGAATTCGAGATTTTTGAAATCATCATCATCATCTTGTTCCTCTTCAATCTACGTTATCGTATCATCTCTAATCTCTTCACTATGAGTAGATCAGGGCAGCCTCCGGATTTGAAGAAGTATATGGACAAGAAGCTTCAGATCAAGCTGAATGCAAACCGGATGATTGTGGGTACTCTCCGGGGTTTTGATCAGTTTATGAATTTAGTTGTTGACAACACCGTGGAAGTGAATGGCACGGAGAAAACTGATATAGGAATGGTGGTAATAAGAGGAAATAGTGTGGTCACCGTTGAAGCACTTGAACCGGTGAACAGGACATGA 438 0.4132 MGYDSNGPKPIEFNGPLNPVEFNGFVTFTSSRTIVRVSNEFEIFEIIIIILFLFNLRYRIISNLFTMSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGTEKTDIGMVVIRGNSVVTVEALEPVNRT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1245 145 Gene3D - 62 144 - -
Lal11g1245 145 CDD Sm_G 72 140 IPR034098 GO:0000387|GO:0005681
Lal11g1245 145 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 41 145 - -
Lal11g1245 145 Pfam LSM domain 75 137 IPR001163 -
Lal11g1245 145 SMART Sm3 74 138 IPR001163 -
Lal11g1245 145 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 41 145 IPR044641 -
Lal11g1245 145 SUPERFAMILY Sm-like ribonucleoproteins 74 141 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1245 Lal-Chr11 16175694 16178238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1245 K11099 - gmx:100305530 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1245 11 16175694 16178238 Lal11g1245 11 16175694 16178238 ECH
Lal11g1245 11 16175694 16178238 Lal1g1754 1 19910074 19911590 LSH
Lal11g1245 11 16175694 16178238 Lal20g0174 20 1202661 1204483 LSH