Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1231 ATGTCATCTGAATCTCACTCCGATCACGACCCCGATCTTCCCGTTCAGCTCCACTTTCCGCCACTCACATCAAGCCTCTTCGATGCCGAAGAAGATTCTCCGAATCAAGAACCAAACGGCGTCGTTCACGGATCTTCTCCTCTTCCTCAACCTCAATCACCTGATGAGGTTTCAATTCGAGGAACCATACCTTCATCTGAACCCTCAAGCCCTTGTAGTAGCGGTTATGCCGGCGAAAGAGGTAGCGTTAGCACCACCGCTACTAGCATTGTCTCTGAAATTCAGGAGATCGTAGTTCACCATGAAATTGAAGAGTTGACCATCGATGATGACCAATATCATGATGCTATCTCTAATTGCAACGACCACGCGCCTATCGGGAAACCACACCGCGATGATGAGGATGATTCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGATGAACACAAGCTTGCTGGATTTTCAGCGACTTTGCAAGCAATCATTTCCTTTGTGGAGAACGGAGGTGATCATGTCAAATTGGTGAGGGCTGGGAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAGCCTTGTGAGTCATTAAGGGGGCAGTTGGAGCTTATTTATGGTCAGATGATTGTTATACTGACACAGTCAGTCAACAAATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCTTTGCTTGGTGGAACAGATATTGTCTTCTCTTCACTAATCCAATCTTTTAGTTGGAATCCAGCTACATTTCTTCACGCCTACACCTGTCTTCCTCTTGCATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAAGATGTTGCTGGTCCAGGTGTTCTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTAGCTAGTGCTCAGAAAGCCACTCTTCATCCAGATGATATGTTGCTGCTGGCCAACTTTGTCATGTCATCAGAATCTCTTAGGCAAGTAGACTGGCAATATTTCTGTCTTTCAGATAGCATATTACATATGGTTTGGTGGACATCAGAATCATTTTCTCCTGTTTGCTTGCCAAGATACAATTCCTTGGCATTTATGTACGCTTATATCCATTTTTTTGATGCTGACACGTACTTGATGTTGCTAACCACTAGTTCAGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATTGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGCTCAGAGATCCTTGCTAGACGGTGGAATGCATGTTGAGGATCTGCCACCCCTACCTCGTTCTGGATCATCTTCTCATTTGGGCCAAAACAGGCCTCCATTGGATTCTCCTGACAAATTGAGAGAACCTAATTCTGGCATTGGTGGTGCTGCTGGGTTATGGCATTTCATATATCTCAGTATATATCTGGATCAATATGTATCTTCAGAGTTCTCATCACCGATTAACACTTCTCAGCAACAAAAAAGGCTATATAGAGCTTACCAGAAACTTTTTGTGTCAATGCATGATAAAGGGATTGGGCCGCACAAAACTCAGTTTAGAAGGGATGAAAATTACGCTCTTCTTTGTTGGGTGACCCAAGATTTTGAACTCTATGCTGCATTTGATCCCCTTGCAGACAAGGTGGATGGATTATTAGACAAGGAGAATTTCACTTTGGAAGAGCTTTTGGACGAAGACGAAATAATCCAAGAATGCAAAGCCCTAAACAGCCGTCTCATCAACTTTCTGAGAGATCGAACTCAGGTTGAGCAGTTGTTACGCTACATCGTTGAAGAACCACCAGAAGATGCTGACAGCAAACGGGCTTTAAAGTTTCCGTTCATTGCCTGTGAAATTTTTTCGTGTGAAGTCGATGTTATTTTGAAGACCTTGGTGGATGAAGAAGAGCTGATGAACTTATTATTCTCCTTCTTGGAGCCTAATCGTTCTCATAATACCTTGCTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCTTAATGATTCGAAAGACAGTGCAACTTATGAATTATGTTCAAGCCCATCAGAATATTTTTCGCCAACTGGTTGATTTGATAGGAACTACATCCATTATGGAGGTTTTGGTTCGGCTAGTAGGAGCTGATGACCATGTGTATCCCCAGTTTACAGATGTGATGCAATGGTTGGCTGAGAGCGACCTCCTTGAGATGATTGTTGACAAACTAAGTCCATCTAGTCCTCCTGAAGTCCATGCTAATGCAGCTGAAACATTATCTGCAATAACTCGAAGTGCTTCATCTACTTTAGCAATTAAACTTTCAAGCCCAAGCTTTGTTTCAAAAATTTTGGGTCATGCATTGGAAGATTCGCACTCGAAGTCTACCCTTGTGAACTCACTTTCAGTGTGTATTTCTTTGTTAGATCCCAAAAGATCTTCTATTTCACCTCCCCCTTTTCAGTCATTCGGAAGTCAGCACATGTATGAGCCGTCTATTCCTGTCAACCCAGAGACTATTGGCGCTATGCTTCTTAAACTTAGTGAATTGCTTAAACTTTTGAATTTGTCATCCGATGAAAAAGTATTGCCTACAACATATGGGGAATTACATCCTCCACTTGGCAAGCATCGATTAAAGATTGTTGAGTTCATGGCAGTACTTCTAAAAACTGGAAATGAAGTGGCAGAAAAAGAAATGGTCAACTCAGGAACCATACGACGAGTTATTGATCTTTTCTTTGAGTACCCATACAATAACTCATTACACCATAATGTAGAAAGTATCATAATATCTTGTTTGGAGAGCAAAACAGATGTCAGTGTTGATCATCTTCTTCGAGAGTGTGATTTAATTACTCGATTTATCCAAGCAGACAAACAGTCTATTCTCTGTGCTGATAGCAATCAGCGAACAGTACTTGCTGCTGGAAAACGGGCACCACGGACAGGAAACTTGGGGCATATTACTCGAATTGTTAACAGACTTGTTCACTTAGCACATAACCGCAGCTGCATACTGAAATATCTTGAGGAAAATAGTGAGTGGAAAGAGTGGCAAGCTATAGTTCTTGAGGAGCGTAATGTGGTTCAGAATGTTCACAATTGGGCTTGTGGACGTCCGATTGCTTTGCAAGACAGGATGAGGGATAGTGATGATGATGATCTTCATGACAGGGACTATGATGTTACAGCTTTAGCAAATAACTTAAGCCAGGCTTTTAAATATAAAATTTATGGTAGTGACGATAATGAAGAGGAACATGGTGGCCTTGATCGAGATGATGAGGATGTCTACTTTGAGGATGACTCTGAACAAGTAGTGATATCATCCCTAAGACTCGGCGATGATCAAGGGAGCAACCTGTTTACAAACTCAAACTGGTTTGCATTCCAAGATGACAGAATGGGTGATGCACCTGGGGATATGGGATCCTCGGAAATTATGGATGAGATAAACTTGAATGGTGCTGCAAGTGGCGGTAACAGTAGTGACGACGAGGTAGTTGTTGGAGAGGATGAAGAATTGGATGAAAGCAAGAACACTGTGAATGATACATCTAGCTCTAGCATGAAATTCAGTGGATTAACCGGTAGTGATTCTACAAATGAAGGCATTTTGAACTTTGAAAATGAAAAGGCAAACATTTCAAATGATACAGGATTCTTCAATTTTGAAGCACCAGACAATGAGGAATTGTTTGGGGACAAGGCTTTACCTGATTGGGTGGGATGGAGTGAACCTTCAAATATGCCAGTTGCCGGTTCAAGCTTCAACCCGTTTGTGGATCAGGATGAGTCTAGTAACAGTATTCCCAATAAACCTCAACCAGGAAGCGCTAATCCTAATTCTCCTTCTAACGGGGAATCCTTTCCTTCAAATGGGTCGCCAACTACTAAAGATTCGTTGGTGGGTGGTGGTGACATGAGTCATGGATCAGTACCAGTATCCTCACTATTTGAAAAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGCACTGAGAAAGCAATGGGACAGGCTCTGAAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAAGGAACATAGTCTCTAAAGTGACAGAAAAGGAAAATTCTGAAGAGGGTGGTCCTGAAATGAAGGAATTCAATGATGCTAATTACTGGAGAGTTGATCAGAAGGTTGCTGTTCTGGAGTGA 4215 0.4199 MSSESHSDHDPDLPVQLHFPPLTSSLFDAEEDSPNQEPNGVVHGSSPLPQPQSPDEVSIRGTIPSSEPSSPCSSGYAGERGSVSTTATSIVSEIQEIVVHHEIEELTIDDDQYHDAISNCNDHAPIGKPHRDDEDDSSISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPCESLRGQLELIYGQMIVILTQSVNKCFEKNPKFDMTPLLGGTDIVFSSLIQSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVAGPGVLFAILMCRHKVISLASAQKATLHPDDMLLLANFVMSSESLRQVDWQYFCLSDSILHMVWWTSESFSPVCLPRYNSLAFMYAYIHFFDADTYLMLLTTSSDAFYHLKDCRIRIEMVLLKSNVLSEAQRSLLDGGMHVEDLPPLPRSGSSSHLGQNRPPLDSPDKLREPNSGIGGAAGLWHFIYLSIYLDQYVSSEFSSPINTSQQQKRLYRAYQKLFVSMHDKGIGPHKTQFRRDENYALLCWVTQDFELYAAFDPLADKVDGLLDKENFTLEELLDEDEIIQECKALNSRLINFLRDRTQVEQLLRYIVEEPPEDADSKRALKFPFIACEIFSCEVDVILKTLVDEEELMNLLFSFLEPNRSHNTLLAGYFSKVVVCLMIRKTVQLMNYVQAHQNIFRQLVDLIGTTSIMEVLVRLVGADDHVYPQFTDVMQWLAESDLLEMIVDKLSPSSPPEVHANAAETLSAITRSASSTLAIKLSSPSFVSKILGHALEDSHSKSTLVNSLSVCISLLDPKRSSISPPPFQSFGSQHMYEPSIPVNPETIGAMLLKLSELLKLLNLSSDEKVLPTTYGELHPPLGKHRLKIVEFMAVLLKTGNEVAEKEMVNSGTIRRVIDLFFEYPYNNSLHHNVESIIISCLESKTDVSVDHLLRECDLITRFIQADKQSILCADSNQRTVLAAGKRAPRTGNLGHITRIVNRLVHLAHNRSCILKYLEENSEWKEWQAIVLEERNVVQNVHNWACGRPIALQDRMRDSDDDDLHDRDYDVTALANNLSQAFKYKIYGSDDNEEEHGGLDRDDEDVYFEDDSEQVVISSLRLGDDQGSNLFTNSNWFAFQDDRMGDAPGDMGSSEIMDEINLNGAASGGNSSDDEVVVGEDEELDESKNTVNDTSSSSMKFSGLTGSDSTNEGILNFENEKANISNDTGFFNFEAPDNEELFGDKALPDWVGWSEPSNMPVAGSSFNPFVDQDESSNSIPNKPQPGSANPNSPSNGESFPSNGSPTTKDSLVGGGDMSHGSVPVSSLFEKDVEFVGVELEGTEKAMGQALKEGIVGEAGPLKRNIVSKVTEKENSEEGGPEMKEFNDANYWRVDQKVAVLE 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1231 1404 SUPERFAMILY ARM repeat 716 952 IPR016024 -
Lal10g1231 1404 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 566 1402 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 28 81 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 1193 1216 - -
Lal10g1231 1404 Pfam SIT4 phosphatase-associated protein 684 910 IPR007587 GO:0019903|GO:0043666
Lal10g1231 1404 Pfam SIT4 phosphatase-associated protein 910 1043 IPR007587 GO:0019903|GO:0043666
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 146 163 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 164 184 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 198 212 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 249 261 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 370 393 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 398 424 IPR004353 GO:0006623
Lal10g1231 1404 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 546 560 IPR004353 GO:0006623
Lal10g1231 1404 Pfam First Longin domain of FUZ, MON1 and HPS1 146 266 IPR043972 GO:0016192
Lal10g1231 1404 MobiDBLite consensus disorder prediction 451 473 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 1265 1326 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 1265 1314 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 1166 1216 - -
Lal10g1231 1404 MobiDBLite consensus disorder prediction 1 81 - -
Lal10g1231 1404 Pfam Second Longin domain of FUZ, MON1 and HPS1 307 417 IPR043971 GO:0016192
Lal10g1231 1404 Pfam Third Longin domain of FUZ, MON1 and HPS1 483 566 IPR043970 GO:0016192
Lal10g1231 1404 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 566 1402 IPR007587 GO:0019903|GO:0043666
Lal10g1231 1404 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1231 Lal-Chr10 18636114 18654281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1231 K15501 - gmx:100802276 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1231 10 18636114 18654281 Lal10g1231 10 18636114 18654281 ECH
Lal25g0184 25 1191721 1196236 Lal10g1231 10 18636114 18654281 LSH
Lal10g1231 10 18636114 18654281 Lal9g0273 9 1683459 1689187 PCT
Lal9g0273 9 1683459 1689187 Lal10g1231 10 18636114 18654281 PCT