Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1182 ATGGAGGTTAATACTATTGTTGATCCACTACCTGTTTCAAAAGCACAATCCAGCGCACGACCGAGAAAGAAGTCTATTGTCTGGGAACATTTCACTCTGAAAACATTGGACCCCAGATGTTCCAAGGCTTACTGCAAACAGTGTGGAAAAGAATTTGCTTATATAACGGATTCGAAACAAATTGGCACCAGCCATCTCAAGCGACACATTTCTTTGGGAATTTGTCAGAAAAACCAATCCAAAATTAGTGCTTCAGGAGGAGATGCCGCTGCCTATCCACAAAAGAAACGAGCAAGAGCATCACCTTGCATTGCAAGTATCTCTTTTGATCAGGAATGTTGCAACAATAATATTGCTAAAATGATCATTTTACATGATTATCCACTTCATATTGTGGAACACCAGGGCTTCATTAATTTTGTGCGGACACTCCAACCACAGTTTAATCCACTAAGCGTTAACACCATCAAAGGGGATTGTGTCTCTATGTACCTCAGAGAAAAGCAAAATCTGTTGAATCTTATCAATGAGATTCCTGGACGAGTCAACCTCACATTGGACTTATGGACTTCAAATCAGACACTGGCCTACGTTTTTCTTCGAGGACATTTCATTGACAGTGATTGGAACTTACATAAGCCCATTCTCAAGGTTATGGTGTTGCCATTTCTTGATTCTGACAATTCCTTAAATCAAGCTATAGTATCCTGTCTAAGTAATTGGCATTTGGAGGGTCGAATATTTACCCTTGCACTTGATAAATTCTTCTCGAATGAGACAGTGATAGGAAATTTGAGGGGTCACCTATCTGTTAAGAACCCCGTGCTCCTAAATGGTCAATTATTAAGCAAGAACTGTTATGCTCGTGTGCTTAGTCGCCTTGCATTAGACGCGCTATTCGCAATGACAGAAACTGTTAGTAAAGTTCGTGAGAGTGTGATGTATATGAAATCTTCAAAATATCATGAAAGTAAGTTTTTTGAGCTGAAGCAGCAACTCCAAGTCCCTGGTATGGTTGATCTTTTAATTGATGAGCAAAATAAATGGGACACAATTTATCACATGCTTGTAGCTGCCTGTGAACTAAAGGAAGTATTTGCCTGCTTTGATGCCTTTGATCCTAATTACAAAACGACTCTCACAATGGATGAGTGGAAGCAGGTGGAAACTCTCCACACACATTTGAAGTATTTGTATGATGCAGCTAACATTTTAACTGTCCAACCATGCCCTACTGCAAACTTATTTTTCCCTACAGTGTCAAAACTTCACATGCAGTTGGCAAATGCAACATTCAGCCAGGACCCTTTCTGTAGTAGTTTGATCACGCCTTTGCAAGTGAAGTTTGACCAATATTGGAGAGAAAGCTGCCTCATCTTGGCAGTCGCTGTAGCCATGGATCCGAGGTATAAAATGAAACTTGTGGAATCCACCTTTGCTAAGATATTTGGTGAGAATGCGGAGCTATGGATAAGAATGGTTGAGGTTGGTCTTCATGAACTATTTGTTGAATACATCATACAATTGCTTCCTCCGTCGTCAAAAAATGCTGAAGAGGGGAATGGGGCTATGTTAAAGACCGAGCTGTTAACGCTTTCTTCATCATCAACAACAAATGACGATGAAGGGGATGAGTTTATGATAAAGGTTGCACCGTTGATGCTTACTTCAACAGCAACGAATGGTGATGAAGGGAATAAGATAAAGATTGAGGCATGTCAAGAAGGGTCTATTGATGGTTCTCTTTTTGCTGCCGAAGATGAACTTTCTGATATTGAATATTACTTATCTGACTTTACAGGTAACTATCAATTTAATTCAGAATTAAATGAGTATCTGGAAGAACATTTGGAGCCAAATGTAGAAGAATTTGATGTTCTGAGCTGGTGGAGAGTAAATGGATTGAAGTATCCCACTTTATCTAGAATGGCATCTGATATTTTGTCTATGCCAGTATCCACTGTCTCTCCAGAATCTGTTTTTGACACAGAAACTAGAAAAATGGATAGTTATAGGAGTTCACTAGACCCCATGACTCTTGAGGCTCTTATTTGTACCAAGGATTGGTTCCTGCATGAATCATTACCTATTGACTTACCAAATGGATTCTCAAGTAGCTTTTAG 2124 0.395 MEVNTIVDPLPVSKAQSSARPRKKSIVWEHFTLKTLDPRCSKAYCKQCGKEFAYITDSKQIGTSHLKRHISLGICQKNQSKISASGGDAAAYPQKKRARASPCIASISFDQECCNNNIAKMIILHDYPLHIVEHQGFINFVRTLQPQFNPLSVNTIKGDCVSMYLREKQNLLNLINEIPGRVNLTLDLWTSNQTLAYVFLRGHFIDSDWNLHKPILKVMVLPFLDSDNSLNQAIVSCLSNWHLEGRIFTLALDKFFSNETVIGNLRGHLSVKNPVLLNGQLLSKNCYARVLSRLALDALFAMTETVSKVRESVMYMKSSKYHESKFFELKQQLQVPGMVDLLIDEQNKWDTIYHMLVAACELKEVFACFDAFDPNYKTTLTMDEWKQVETLHTHLKYLYDAANILTVQPCPTANLFFPTVSKLHMQLANATFSQDPFCSSLITPLQVKFDQYWRESCLILAVAVAMDPRYKMKLVESTFAKIFGENAELWIRMVEVGLHELFVEYIIQLLPPSSKNAEEGNGAMLKTELLTLSSSSTTNDDEGDEFMIKVAPLMLTSTATNGDEGNKIKIEACQEGSIDGSLFAAEDELSDIEYYLSDFTGNYQFNSELNEYLEEHLEPNVEEFDVLSWWRVNGLKYPTLSRMASDILSMPVSTVSPESVFDTETRKMDSYRSSLDPMTLEALICTKDWFLHESLPIDLPNGFSSSF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1182 707 Pfam Domain of unknown function (DUF4413) 409 505 IPR025525 GO:0003677
Lal10g1182 707 SUPERFAMILY Ribonuclease H-like 176 690 IPR012337 -
Lal10g1182 707 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 10 695 - -
Lal10g1182 707 SMART bed5 22 78 - -
Lal10g1182 707 SUPERFAMILY beta-beta-alpha zinc fingers 25 71 IPR036236 -
Lal10g1182 707 ProSiteProfiles Zinc finger BED-type profile. 22 82 IPR003656 GO:0003677
Lal10g1182 707 PANTHER BED FINGER-RELATED 10 695 IPR045259 -
Lal10g1182 707 Pfam hAT family C-terminal dimerisation region 608 690 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1182 Lal-Chr10 18339481 18341604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1182 - - lang:109351164 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1182 10 18339481 18341604 Lal10g1182 10 18339481 18341604 ECH
Lal25g0245 25 1696511 1698775 Lal10g1182 10 18339481 18341604 LSH
Lal10g1182 10 18339481 18341604 Lal20g1224 20 16727312 16732841 PCT
Lal20g1224 20 16727312 16732841 Lal10g1182 10 18339481 18341604 PCT