Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0020 ATGGGTAGGAGACGACTTCATCTATTTGATGACAAAAAAGATGCCTTTTTCTCAGTTTATGATCTGGGTCTTAACAAAGAAGGCCAATATTATTATCACCCTGAAGCCTTATTTGCAAGTGTTGGCCAAATGGGAATGAGTTTTTCTGTTCATGAGGAAAGGGTTATGAATAATAGCAAGAAAAAGTTGAAGATCAAGGTAAAGAACCCTTCACTTAGGAGGTTGATAAGTGGTGCATTTGCAGGAGCAGTTTCAAGGACTTTGGTGGCACCTTTGGAGACTATAAGGACTCATTTGATGGTTGGAACTAGTGGTCATTCTACTTCTGAGGTCTTCCATGATATTATGATCAATGATGGCTGGAAGGGTTTGTTTAGGGGTAATTTCGTCAATGTCATTCGAGTTGCTCCTAGCAAGGCCATTGAGCTTTTTGCTTTTGATACAGTTAACAAAAGCCTATCACCAAAACCTGGGGAACAACCGAAACTCCCTATTCCTCCATCATTGATAGCCGGTGCCTGTGCTGGAGTTAGCTCAACTATATGCACATATCCTCTCGAGTTACTCAAAACTCGATTAACTGTACAGAGAGGTGTCTATAATGGTCTACTTGATGCATTCTTGAAAATAATTAAAGAAGAGGGTCCTTCAGAACTTTATAGAGGCCTTGCTCCTAGTCTTATTGGAGTTATTCCATATTCAGCCACCAATTACTTTGCCTATGACACTCTAAGGAAAACATACAGAAAATTTAGTAAAAAAGAAAAGATTGGCAACATTGAAACTCTTCTGATAGGATCAGCAGCTGGTGCTATTTCAAGTTCTGCGACTTTTCCGCTCGAAGTGGCGCGAAAGCATATGCAAGTTGGAGCCCTGAGTGGAAGGCAAGTTTACAAGAATGTGATTCATGCCCTTGCCACCATACTAGAACAAGAAGGGATCCAAGGTTTGTATAGAGGGTTAGGACCAAGTTGCATGAAGTTAGTGCCTGCTGCAGGAATCTCATTTATGTGTTATGAAGCTTGCAAGAGGATACTGGTTGAGAATGATGATGAGGAATAG 1062 0.4077 MGRRRLHLFDDKKDAFFSVYDLGLNKEGQYYYHPEALFASVGQMGMSFSVHEERVMNNSKKKLKIKVKNPSLRRLISGAFAGAVSRTLVAPLETIRTHLMVGTSGHSTSEVFHDIMINDGWKGLFRGNFVNVIRVAPSKAIELFAFDTVNKSLSPKPGEQPKLPIPPSLIAGACAGVSSTICTYPLELLKTRLTVQRGVYNGLLDAFLKIIKEEGPSELYRGLAPSLIGVIPYSATNYFAYDTLRKTYRKFSKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALATILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVENDDEE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0020 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 247 IPR018108 -
Lal10g0020 353 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 50 352 - -
Lal10g0020 353 PANTHER SOLUTE CARRIER FAMILY 25 50 352 - -
Lal10g0020 353 Pfam Mitochondrial carrier protein 257 349 IPR018108 -
Lal10g0020 353 Pfam Mitochondrial carrier protein 163 250 IPR018108 -
Lal10g0020 353 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Lal10g0020 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 345 IPR018108 -
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 127 147 IPR002067 GO:0055085
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 178 196 IPR002067 GO:0055085
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 220 238 IPR002067 GO:0055085
Lal10g0020 353 PRINTS Mitochondrial carrier protein signature 266 288 IPR002067 GO:0055085
Lal10g0020 353 Gene3D Mitochondrial carrier domain 65 351 IPR023395 -
Lal10g0020 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 152 IPR018108 -
Lal10g0020 353 SUPERFAMILY Mitochondrial carrier 70 341 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0020 Lal-Chr10 231689 234848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0020 1 352 Organic Solute Cotransporters AT4G32400 64.194 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0020 K14684 - qsu:111999876 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0020 10 231689 234848 Lal10g0020 10 231689 234848 ECH
Lal10g0020 10 231689 234848 Lal17g0236 17 1461458 1464644 PCT
Lal10g0020 10 231689 234848 Lal21g0343 21 2335554 2340067 PCT
Lal17g0236 17 1461458 1464644 Lal10g0020 10 231689 234848 PCT
Lal21g0343 21 2335554 2340067 Lal10g0020 10 231689 234848 PCT