Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2279 ATGTGCACTGGTGCTGAATCTCGAGGAATTGTAGATGGTAATAACCCCGTGACTAATTCAAAGGTTGGAGGAGTGTACCATGAGATCAACGGAATGAGAAGCACAGAAGGTGGTGATGGTGAAGGAAAAAGAAACAGTGGTTGTTCTGGCAGATTCATTCAAGGCCTTCATCAACACTTGCATCAACTCCTCAAGGCACTTTTCCCTACCCTTTCTCTCTCTGAGGTGAAAGAAGAGTTGAAATCACTAGCCAACATTGCATGTCCAATGATGATGACCAACGTGCTTTTGTATTCTCGATCCGCTATTTCCATGCTTTACTTGGGTCGCCAAGGGAAAGTGGAGCTAGCAGGAGGATCACTTGCAATAGGGTTTGCCAACATCACTGCCAATTCATTTCTCAAGGGTCTCACCATGGGAATGGACCCAATTTGTTGCCAAGCATATGGTGCAAAAAGATGGTCAGTTTTAAGCCAAACTTTTTGCAAAACCTTGTGCCTCCTCCTCCTTGTAGCCATCCCCATTTCACTCCTTTGGCTCAACATGGCACCTCTCCTTCATTGGCTAGGGCAAGACCCTGAAGTCACAAAAGTTGCACAAGTTTACATGGTCTTCTCTATCCCAGAATTGCTTGCTCAAGTTCATCTCAACCCTTTAAGGTCTTTTTTAAGAACACAAGGGTTAACAACACCATTAACTATTGCAGCTTCTTTTGCTGCCATCTTACACCTTCCAATAAACTATTTCTTGGCTACATATTTGGAATTAGGAGTAAAAGGCATTGCATTAGCCACAGGTTTGAACTCCATAAACATGATACTAGGGTTGGTGCTTTATCTTGTTGTGTCAGAGAAACCCTTAAAGCCTTGGGAAGGTGTTACTATTCTCTCTTCCTTTCATGATTGGAGACCATTGCTAACCCTAGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGCTATGAGATAATGCTCTTCCTATGTGGCTTGTTGAGTAATCCACAAACCACAATTGCTACCATGGGTGTACTAATTCAAACAACTGGGTTCTTATATGTGTTCCCATTTTCACTAAGTGCAGCATTGACGACACAAATTGGTCACTCCTTAGGTGCAGGTCAACCTTCACGTGCACAAAACACAGCCAAAATAGGACTCTTCATTGCATTTGCATTAGGTGTCTCAGCCTTTGTTTTCTTATTGTTTGTGAGGAATGTGTGGGGGAAACTCTTCACAAACGAGACACAAATTGTTGACATGGTCACAGCCATACTTCCAATTTTAGGGTTGTGTGAGATTGGAAACTGGCCTCAAACTGCTGCGTGTGGGATCTTATCAGGGACTGCACGGCCTTATGTGGGTGCAAGAATAAACTTGTGTGCTTTTTACTTGATTGGATTGCCGGTTGCGATTTTTGCTGCTTTCATGCACAGGTACCAATTGAGGGGCTTGTGGTTTGGAATGCTAGCAGCACAAATTTCGTGTTTTTGTATGATGGTTTACACGTTGGTTCAGACGGATTGGGGGCACCAAAGTAGAAGAGCTGAGCAATTGGCTCAAACAACAGATGAGGAAAATGTAAATAATGATGAGAAAAGTGGGCTCCTTGATTCTGATTTATGA 1629 0.4328 MCTGAESRGIVDGNNPVTNSKVGGVYHEINGMRSTEGGDGEGKRNSGCSGRFIQGLHQHLHQLLKALFPTLSLSEVKEELKSLANIACPMMMTNVLLYSRSAISMLYLGRQGKVELAGGSLAIGFANITANSFLKGLTMGMDPICCQAYGAKRWSVLSQTFCKTLCLLLLVAIPISLLWLNMAPLLHWLGQDPEVTKVAQVYMVFSIPELLAQVHLNPLRSFLRTQGLTTPLTIAASFAAILHLPINYFLATYLELGVKGIALATGLNSINMILGLVLYLVVSEKPLKPWEGVTILSSFHDWRPLLTLALPSCISVCLEWWCYEIMLFLCGLLSNPQTTIATMGVLIQTTGFLYVFPFSLSAALTTQIGHSLGAGQPSRAQNTAKIGLFIAFALGVSAFVFLLFVRNVWGKLFTNETQIVDMVTAILPILGLCEIGNWPQTAACGILSGTARPYVGARINLCAFYLIGLPVAIFAAFMHRYQLRGLWFGMLAAQISCFCMMVYTLVQTDWGHQSRRAEQLAQTTDEENVNNDEKSGLLDSDL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2279 542 Pfam MatE 89 249 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2279 542 Pfam MatE 311 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2279 542 TIGRFAM matE: MATE efflux family protein 89 487 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g2279 542 MobiDBLite consensus disorder prediction 520 542 - -
Gso9g2279 542 PANTHER MULTIDRUG RESISTANCE PROTEIN 63 527 - -
Gso9g2279 542 CDD MATE_eukaryotic 79 516 IPR045069 GO:0042910|GO:1990961
Gso9g2279 542 PANTHER PROTEIN DETOXIFICATION 53 63 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2279 Gso-Chr9 47017973 47022015 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2279 K03327 - gmx:100816717 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2279 9 47017973 47022015 Gso1g1121 1 45458492 45460087 PCT
Gso9g2279 9 47017973 47022015 Gso3g0310 3 4623736 4630359 PCT
Gso1g1121 1 45458492 45460087 Gso9g2279 9 47017973 47022015 PCT
Gso3g0310 3 4623736 4630359 Gso9g2279 9 47017973 47022015 PCT