Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1121 ATGCAGTTGAAAGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCCATAATAATGACTAGCCTAATGATGTACTCTCGATCTGCTGTGTCCATGTTGTTCTTGGGTCGGCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTAGCACTTGGATTTGCCAACATCACAGCCAATTCAGTCCTCAAAGGCCTCACTATGGGAATGGACCCAATTTGTTGCCAAGCATATGGAGCCAAGAGATGGTCAGTTCTCAACCAAACCTTTCTCAGAACTCTGTGTCTCCTCCTACTTGTTGCCATACCAATTTCAATTTTATGGCTAAACATGGAACCAATCCTTCAGATGCTAGGTCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTCTTCTCTATTCCAGAGTTGCTAGCTCAGGCTCATCTCAATCCATTGAGGTCCTTCCTTAGAACTCAAGGCTTAACCACCCCAGTTACTATAGCTGCTTCTTGTGCAGCACTCTTGCACCTTCCCATCAACTATTTCTTGGCCACATACTTAAACTTGGGAGTAAAGGGTATTGCATTAGCCACTGGTTTGAACTCAATAAACATGACTTTGGGTTTGTTGCTCTATATTTTGTTCTCAAAGAAACCACTGAAGCCTTGGCAAGGTGCTACACTTCTCTCAGCCTTTCATGGATGGAAACCATTGCTGAGTTTGGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTCTTTCTGTGTGGCCTGTTGAGCAATCCACAAGCCACAGTTGCTACCATGGGGATCCTCATTCAAACACTAGGGTTCTTGTATGTGTTCCCATTCTCACTAAGCATAGCCTTGACAACAAGAATTGGTCACTCTTTAGGTGCAGGGCAAGCATCCAAGGCCCAAAGCACAGCCATAATAGGGTTTCTCACAGCATTCACCTTGGGCCTCACTGCCTTCATTTTGCTGTTTCTTGTGAGGAAATCATGGGGGAAACTTTTCACTAATGAGACACAAATTGTTGAGCTGGTCACAACCATACTTCCCATTCTAGGCTTGTGTGAGGTTAGCAATTGGCCTCAAACAGTTTCATGTGGGATTTTGTCAGGCACTGCTAGGCCTTATTTGGGTGCCAGAATAAACTTGTGTGCATTTTATCTAGTTGGATTGCCAGTTTCTGTTTTTGCTACATTCATATATAAATATGAATTGGTGGGTTTGTGGTCTGGAATGGTGGCTGCACAGGCTTCATGTCTTTGTATGATGGTTTACACATTGATTCAAACAGATTGGGAGCAGCAATGTAAGAGGGCAGTGGAGCTAGCTCAGAAAACAACAGAGCGGGAAAATAAAAATGATGATGAGGAAAGTGGGTTGCTTGGTTCTGATCAATGA 1413 0.4409 MQLKEELQSLAKVACPIIMTSLMMYSRSAVSMLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRWSVLNQTFLRTLCLLLLVAIPISILWLNMEPILQMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLLLYILFSKKPLKPWQGATLLSAFHGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAIIGFLTAFTLGLTAFILLFLVRKSWGKLFTNETQIVELVTTILPILGLCEVSNWPQTVSCGILSGTARPYLGARINLCAFYLVGLPVSVFATFIYKYELVGLWSGMVAAQASCLCMMVYTLIQTDWEQQCKRAVELAQKTTERENKNDDEESGLLGSDQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1121 470 PANTHER PROTEIN DETOXIFICATION 53 3 454 - -
Gso1g1121 470 PANTHER MULTIDRUG RESISTANCE PROTEIN 3 454 - -
Gso1g1121 470 Pfam MatE 16 176 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1121 470 Pfam MatE 238 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1121 470 CDD MATE_eukaryotic 6 443 IPR045069 GO:0042910|GO:1990961
Gso1g1121 470 MobiDBLite consensus disorder prediction 450 470 - -
Gso1g1121 470 TIGRFAM matE: MATE efflux family protein 16 414 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso1g1121 470 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1121 Gso-Chr1 45458492 45460087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1121 K03327 - gmx:100786948 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1121 1 45458492 45460087 Gso3g0310 3 4623736 4630359 GST
Gso9g2279 9 47017973 47022015 Gso1g1121 1 45458492 45460087 PCT
Gso1g1121 1 45458492 45460087 Gso9g2279 9 47017973 47022015 PCT