Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0310 ATGTGCACTGGTGCTGAATCTCGAGGAGATATAAATGGTGATCCTGTGATTTCAAAGGTTGGAGGAGGAGACTATGAGGATAGAATGAGAACCATAGAATTGGAAGGTGGTGGAGAAGAAAGAGCTTGCAACTGTGGCACATTTGTTCAAGGGCTTCTTCAAGGCATACACCATCATCTCACTGCCCTTAATCTCCCTACCCTTTCTGCTTCTGAGTTGAAAGAAGAGTTGCAATCTCTTGCAAAGGTTGCATGTCCCATAATAATGACTAGCCTAATGATGTACTCTCGATCTGCTGTGTCCATGTTGTTCTTGGGTCGGCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTAGCACTTGGATTTGCCAACATCACTGCAAATTCAGTCCTCAAAGGCCTCACTATGGGAATGGACCCAATTTGTTGCCAAGCATATGGTGCAAAGAGATGGTCAGTTCTCAACCAAACCTTTCTCAGAACTCTATGTCTCCTCCTACTTGTTGCCATACCAATTTCAGTTTTATGGCTAAACATGGAACCAATCCTTCAAATGCTAGGTCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTCTTCTCTATTCCAGAGTTGCTAGCTCAGGCTCATCTTAATCCATTGAGGTCTTTCCTTAGAACTCAAGGCTTAACCACCCCAGTTACTATAGCTGCTTCTTGTGCAGCACTCTTGCACCTTCCTATTAACTATTTCTTGGCCACATACTTAAACTTGGGGGTAAAGGGTATTGCATTAGCCACTGGTTTGAACTCAATAAACATGACTTTGGGTTTGTTGCTATATATTTTGTTCTCAAAGAAACCACTTAAGCCTTGGCAAGGTGCTACACTTCTCTCAGCCTTTCATGGATGGAAACCACTGCTGAGTTTGGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGTTATTTCTGTGTGGCTTGCTGAGCAATCCACAAGCCACAGTTGCTACCATGGGGATCCTCATTCAAACACTAGGGTTCTTGTATGTGTTCCCATTTTCACTAAGCATAGCATTGACAACAAGAATTGGTCACTCACTAGGTGCAGGGCAAGCATCCAAGGCCCAAAGCACAGCCATGATAGGGTTTTTCACAGCATTCACCTTGGGGATCACTGCCTTCATTTTGCTGTTTTTTGTGAGGAAATCATGGGGTAAACTTTTCACTAATGAGACACAAATTGTTGAGTTGGTCACAACCATACTTCCCATTCTAGGGTTGTGTGAGGTTAGCAATTGGCCCCAAACAGTTTCATGTGGGATTTTGTCAGGCACTGCTAGGCCTTATTTGGGTGCAAGAATAAACTTGTGTGCATTTTATCTAGTTGGATTGCCAGTTTCTGTTTTTGCTACATTCATATACAAGTATGAATTGGTGGGTTTGTGGTCTGGAATGGTGGCTGCACAGGCTTCATGTCTTTGTATGATGGTTTACACATTGATTCAAACAGATTGGGGGCAACAATGTAAGAGGGCTTTGGAGCTAGCTCAGAAAGCAACAGAGCAGGAAAATAAAAATGATGAGGAAAGTGGGTTGCTTGGTTCTGATCAATGA 1620 0.4346 MCTGAESRGDINGDPVISKVGGGDYEDRMRTIELEGGGEERACNCGTFVQGLLQGIHHHLTALNLPTLSASELKEELQSLAKVACPIIMTSLMMYSRSAVSMLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRWSVLNQTFLRTLCLLLLVAIPISVLWLNMEPILQMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLLLYILFSKKPLKPWQGATLLSAFHGWKPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAMIGFFTAFTLGITAFILLFFVRKSWGKLFTNETQIVELVTTILPILGLCEVSNWPQTVSCGILSGTARPYLGARINLCAFYLVGLPVSVFATFIYKYELVGLWSGMVAAQASCLCMMVYTLIQTDWGQQCKRALELAQKATEQENKNDEESGLLGSDQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0310 539 PANTHER PROTEIN DETOXIFICATION 53 60 524 - -
Gso3g0310 539 TIGRFAM matE: MATE efflux family protein 86 484 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso3g0310 539 CDD MATE_eukaryotic 76 513 IPR045069 GO:0042910|GO:1990961
Gso3g0310 539 Pfam MatE 86 246 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso3g0310 539 Pfam MatE 308 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso3g0310 539 PANTHER MULTIDRUG RESISTANCE PROTEIN 60 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0310 Gso-Chr3 4623736 4630359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0310 K03327 - gmx:106798137 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0310 3 4623736 4630359 Gso3g0310 3 4623736 4630359 ECH
Gso1g1121 1 45458492 45460087 Gso3g0310 3 4623736 4630359 GST
Gso9g2279 9 47017973 47022015 Gso3g0310 3 4623736 4630359 PCT
Gso3g0310 3 4623736 4630359 Gso9g2279 9 47017973 47022015 PCT