Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2258 ATGACTAGGCAACCAAGCTCAATGGAGAGCTTTGGTGTGTGCATTATTTCTTTGATTCTTCTTTTGATGCTTACTAAAAATTTAAGTTCCAATGCACTTGGTGACAGTATAAAGGATGAGGAAGGACTCAAAGAAGACCAAAATGAAATGGAAAATTCTCTCTCAAATAATGATGAAATGAGGGGCATGAAAGATGATGATTGGCAGATGGTGCAAAAGAAAGGAAACCAATTTGTGGTGAATGACAAACCTTTCTATGTCAATGGATTCAACACGTATTGGCTGATGGTATTTGCTGCAGATGAGTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACAAGCATCCTCAGTTGGTATGACAGTTTGTAGGACTTGGGCATTCAATGATGGCCAGTGGAGGGCCCTACAGAAATCCCCATCAGTTTATGATGAAGAAGTCTTCAAGGCTTTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTTATATTATCATTGGCCAACAACTGGGAGGCATATGGAGGCAAAGCACAATATGTGAAATGGGGCAATGCTGCTGGCCTTAACTTGACCTCTGATGATGACTTCTTCTCACATCCAACTCTTAGAAGCTACTACAAGGCCCATGTTAAGACTGTGCTCAATAGAGTTAACACATTCACAAACATCACTTATAAGGAAGATCCAACAATTTTCGCTTGGGAATTGATGAATGAGCCTCGTTGCACCTCAGATCCAACTGGTGACAAGTTACAGGATTGGATACAAGAAATGGCTTTCCATGTGAAGAAAATTGATCCAAAACACCTAGTGGAGGTCGGAGTAGAAGGATTTTATGGGCCATCAACACCTCAGAGAACTCAGCTCAATCCCAATACATATGCTACACAGGTTGGAACTGATTTTATCCGGAACCACCTGGTTCTTGGTGTGGACTTCGCTTCTGTTCACATGTATCCTGACTCTTGGATTTCACAACAAATTGCTGATACACATATCCCATTTGTAAAATCATGGATGGAAGCCCATATAGAGGATGCTGAAAGGTATCTTGGAATGCCAGTTGTTTTTGCGGAGTTTGGTGTATCTTCCAAAGACCCTGGCTATAATTCATCATATAGAGACACGGTTATAAGCACTGTGTACAGTACCATCCTAAACTCCACAAAGAAAGGAGGGAGTGGGGCTGGAAGCCTTTTGTGGCAATTTTTTCCTGATGGAACCGATAACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCTCCTTCTACCTCAAGCATTATACAACTTCAATCCACTAGGCTTGCACTGTTTAATTCCTTGTGCAACACCAAATGCAATTGGGGTTGTAAGAAGAAAAAATTGTTGGAGGAAATACTCTATCATGACGAACTGTAA 1410 0.4106 MTRQPSSMESFGVCIISLILLLMLTKNLSSNALGDSIKDEEGLKEDQNEMENSLSNNDEMRGMKDDDWQMVQKKGNQFVVNDKPFYVNGFNTYWLMVFAADESTRGKVTEVFKQASSVGMTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDPTGDKLQDWIQEMAFHVKKIDPKHLVEVGVEGFYGPSTPQRTQLNPNTYATQVGTDFIRNHLVLGVDFASVHMYPDSWISQQIADTHIPFVKSWMEAHIEDAERYLGMPVVFAEFGVSSKDPGYNSSYRDTVISTVYSTILNSTKKGGSGAGSLLWQFFPDGTDNMDDGYAIVLSKSPSTSSIIQLQSTRLALFNSLCNTKCNWGCKKKKLLEEILYHDEL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2258 469 Gene3D Glycosidases 68 442 - -
Gso9g2258 469 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 15 469 - -
Gso9g2258 469 SUPERFAMILY (Trans)glycosidases 71 428 IPR017853 -
Gso9g2258 469 Pfam Cellulase (glycosyl hydrolase family 5) 81 383 IPR001547 GO:0004553|GO:0071704
Gso9g2258 469 MobiDBLite consensus disorder prediction 39 59 - -
Gso9g2258 469 PANTHER - 15 469 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2258 Gso-Chr9 46849641 46852382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2258 65 469 Glycoside Hydrolase AT5G01930 72.973 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2258 K19355 - gmx:100805357 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1749 18 49868776 49871546 Gso9g2258 9 46849641 46852382 GST
Gso9g2258 9 46849641 46852382 Gso3g0022 3 214306 218270 PCT
Gso3g0022 3 214306 218270 Gso9g2258 9 46849641 46852382 PCT