Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2212 ATGGCTTCTTCGGAAGCTGATTCCCGTCTGAAGCAGGTGCTCGTTCCCGCGCTCGAGAAAATCATCAAGAACGCGTCGTGGCGAAAGCACGCGAAGCTCTCGCACGAGTGCAAGTCCGTGGTCGAAATCCTAACCTCGCCGCCGAAGCCTCAATCGCCTGCCTCCGACGAAGCCGCTGAGCCGGAGGCCTCGGTCCCCGGCCCAATCCATGATGGAGGTCCCGTGGAGTACTCCCTTGCCGAGTCGGAGTCGATCCTCCGCCCGCTCATTGCCGCCGCGTCCTCCGGCGTCGTGAAGATCGCGGATCCCGCCTTAGATGCCGTGCAGAGGCTCATCGCGCACGGCTTCCTCCGTGGCGAGGCGGACTCCAGTGGTGGAGCCCCCGAGGCGAAGCTCCTCGCGAGCCTGATAGAGGCAGTGTGCAAGTGCCACGACTTCGGCGACGATGCCGTCGAATTGCTCGTGCTGAAGACGCTCTTATCTGCAGTGACATCGATTTCGCTGCGAATTCACGGTGATTGCTTGCTCTTGATTGTGAGAACTTGTTATGACATATACCTTGGTAGTAAGAATGTGGTGAATCAGACGACGGCGAAAGCGTCGTTGATTCAGATGTTAGTGATTGTGTTTAGGAGGATGGAGGCGGATTCGTCCACGGTCCCGATTCAGCCTATTGTTGTGGCTGAATTGATGGATCCCGTGGAGAAAACCGATGTGGATAACTCCATGACGCAGTCTGTTCAGGGTTTTATCACCAGGATTGTGCAGGACATTGATGGAGTTTTGAATCCAGTGACGCCGTCGGCAGCGGCGGCCGCGCACGACGGCGCGTTTGAGACCACCATCACGGCGACGGTGGAGGCTGCAAATCCGGCGGATTTGTTGGATTCCACTGACAAGGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTACAAGACTGCGTTGGAGGGGAGGAAAGAGGAGCTGGTGGATGGGGAGGTGGTGGAGAGGGACGATGATTTGGAGATTCAGATTGGGAATAAGCTCAGGAGAGATGCCTTTTTGGTGTTCAGGGCGCTTTGTAAGTTGTCCATGAAGACGCCTCCCAAGGAGGCGACGGTGGATCCACAGTTGATGAAGGGGAAGATTGTAGCATTGGAGTTGTTGAAGATCTTACTGGAGAATGCTGGAGCTGTCTTCAGGACTAGTGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAATAGTGCCTCAACTCTTTTGGTCGTTTTTCAGCTATCTTGCTCCATCTTCATTAGTCTGGTATCAAGATTTAGAGCTGGACTGAAAGCAGAAATTGGAGTATTTTTCCCCATGATTGTTCTCAGGGTTCTAGAAAATGTTGCTCAACCTAATTTTCATCAAAAGATGATAGTGCTTCGTTTTCTACAGAAGCTTTGTGATGATTCACAGATATTGGTAGACATTTTTATCAACTATGACTGTGATGTCAATTCAACAAACATATTTGAGAGGACGATAAATGGACTTCTTAAAACTGCCCAAGGTGTCCCTCCTGGTGCAACGACCACAGTTTTGCCACCTCAAGAGGAAACACTAAAATATGAAGCCATGAAGTGCTTAGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTCCAGATCCTCATTCAGGCAAGAAAGTTGAAGCAGTTGATAATGGCTATGAAGCTGGAGGCCTTCCCCTGGCAAATGGGAATGAAGAAGAGCCAGTTGAAGGATCAGACACTCATTCTGGAATCTCCAATGAGGTATCTGATGTTTCAACTATTGAACAACGCCGGGCTTATAAACTGAAACTTCAGGAAGGTATATCACTTTTTAACAGGAAGCCGAAGAAAGGAATTGAATTCCTCATCAATGCCAACAAAGTGGGTAATTCACCAGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATTTAGGAGAAAGAGAGGAGTCATCCTTGAAAGTAATGCATGCATATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGCCTTTCTTCAAGGCTTTAGACTGCCTGGGGAGGCACAGAAAATTGATCGAATCATGGAAAAGTTTGCAGAACGATATTGCAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACAGCATATGTCCTTGCATATTCTGTGATTCTGCTTAATACCGATGCTCACAATCCTATGGTGAAAAACAAGATGTCAGCTGAAGATTTCATAAAAAATAATCGTGGCATAGATGATGGAAAAGATGTACCAGAGGAATACTTAAGGTCTTTGTATGAACGAATATCTAGAAATGAGATCAAAATGAAAGAAGTTGATCTGGAAGCCCAGCAAAAACAGGCTGTGAACTCTAACAGACTTTTAGGCTTGGATAGTATATTGAATATCGTGGTCCGGAAGCGTGGGGAAGACAGTAATATGGAGACCAGTGATGATCTAATCCGACATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAGTCAGTCTATTATGCAGCAACTGATGTTGTAATCCTCAGATTCATGATTGAGGTGTGCTGGGCACCAATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAATTGTAATAGCACTGTGTCTTGAAGGCTTCCGTTATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCACAGAGATGCCTTTGTGACTTCATTAGCAAAGTTTACCTCCCTGCATTCTCCTGCTGACATTAAGCAGAAAAACATAGATGCAATCAAGGTGATTGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGATTTGAACATCTACATCTTCTAGGAGAAGGGGCCCCACCAGATGCCACATTCTTTGCATTTCCTCGAAATGATTCTGAAAATACAAAACAAGCGAAATCAACAATTCTCCCCGTTTTGAAGAAAAAGGGACCTGGGAGGATGCAATATGCAGCTGCCACTGTTATGCGGGGTTCATATGATAGCACTGGAATCAGCAGTAATACTACTGGAGCTGTCACATCGGAGCAGGTGAACAATCTAGTTTCTAATTTGAATATGTTGGAACAAGTTGGAAGCTCAGAAATGAATCGCATATACACTCGGAGTCAAAAGCTGAATAGTGAGGCTATAATAGATTTTGTTAAGGCTTTATGCAAAGTCTCCATGGAGGAACTCAGATCTCCATCTGATCCACGGGTGTTCAGCCTTACAAAGATAGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTATGGTCAAGCATTTGGCATGTTCTCTCTGATTTCTTTGTAACCATTGGCTGTTCTGGAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAGGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTCGTCATTGTTATGCGCAAGAGTAGTGCTGTTGAAATTAGAGAACTTATCATTAGATGTGTCTCTCAGATGGTTTTATCTCGTGTCAACAATGTAAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCGGCATATGATGACCACAAAAACATTGTACTCCTGGCTTTTGAAATTATGGAGAAGATTATTCGAGATTACTTTCCATGCATCACTGAGACTGAAACCACTACCTTTACAGATTGTGTGAACTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAAATTAGCTTAAATGCCATTGCTTTCCTTCGATTCTGTGCAACAAAACTAGCAGAAGGAGACCTTGGATCTTCGTCAAGGAATAATGACAAGGAAAGTTATGGAAAGATATCTGCTCCATCACCTCGAACAGGAAAAGAGGGGAAACAAGATAACGGAGAGGTGACAGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTACTGGCTGGTTTGTCTGAGCTTAGCTTTGACCCAAGGTCTGAGATAAGGCAAAGAGCCTTGAAAGTCCTGTTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTACCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCTATTGATCCTTCAGGGAGTACCTCAGAGGTCAATGAAGTAGAGACTGATGGTCAGCTTGATCAAGATGCATGGCTTTACGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTCAACTTCTATAACACCGTCAATCCACTTTTAAGAAAGGTGTTGATGCTCCTGGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTGGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAGAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGAAGCAGCAAATGCAACACTCCCTAACTTTTCATTCCTTGACAGTGGAAACTTTGTGACTGTAAATCATGAGTATGCTTCAATGGCTGAAGATGACAGGGATCCTGCTGAGTCTGGCTCACATGATAATTTAGAAAGCCCGAGGACTCAAAATCTTTATGCATATTTTTCTGATGCAAAGTGCCGAGCTGCTGTTCAACTTTTATTGATCCAGGCGGTGTTGGAGATCTATAACATGTACCGAACTCAACTTTCAGCAAAAACTATACTTGTCTTGTTTGAGGCTTTGCGTGATGTGGCATTACATGCTCACAAGATTAACAGCAATATTATTTTACGTTCAAAGTTACAAGAGTTTGGCTCTATGACTCAAATGCAAGACCCTCCACTGTTACGCCTGGAGAATGAATCCTACCAAATATGTCTCACATTTTTACAGAACCTCGTTGTGGACAGACCTACTAGTTATGAGGAGGTTGAGGTTGAGACACGTCTCATTAGACTTTGTCAGGAGGTGTTGGAGTTCTATATTGAAGTTGCAGGTTCTGGAACAGTATCTGAATCTTCTCATGGTAAACAGCTGCATTGGTTAATTCCTCTTGGCTCGGGGAAGCGAAGAGAATTGGCTGCACGTGCACCGCTTGTTGTGACCACTCTTCAAGCTATTTGTAATTTGGGAGAGATATCTTTCGAGAAGAACCTGGCTCATTTTTTCCCTCTCCTCTCAAGCTTGATAAGTTGCGAACATGGATCAGCTGAGGTTCAGGTAGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTCTTTTGCTACGGTCATGCTGA 5355 0.4398 MASSEADSRLKQVLVPALEKIIKNASWRKHAKLSHECKSVVEILTSPPKPQSPASDEAAEPEASVPGPIHDGGPVEYSLAESESILRPLIAAASSGVVKIADPALDAVQRLIAHGFLRGEADSSGGAPEAKLLASLIEAVCKCHDFGDDAVELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMDPVEKTDVDNSMTQSVQGFITRIVQDIDGVLNPVTPSAAAAAHDGAFETTITATVEAANPADLLDSTDKDMLDAKYWEISMYKTALEGRKEELVDGEVVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPPKEATVDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLVVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFHQKMIVLRFLQKLCDDSQILVDIFINYDCDVNSTNIFERTINGLLKTAQGVPPGATTTVLPPQEETLKYEAMKCLVAVLKSMGDWMNKQLRIPDPHSGKKVEAVDNGYEAGGLPLANGNEEEPVEGSDTHSGISNEVSDVSTIEQRRAYKLKLQEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLNKTLIGDYLGEREESSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSAEDFIKNNRGIDDGKDVPEEYLRSLYERISRNEIKMKEVDLEAQQKQAVNSNRLLGLDSILNIVVRKRGEDSNMETSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEIVIALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPRNDSENTKQAKSTILPVLKKKGPGRMQYAAATVMRGSYDSTGISSNTTGAVTSEQVNNLVSNLNMLEQVGSSEMNRIYTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIMEKIIRDYFPCITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAEGDLGSSSRNNDKESYGKISAPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQRALKVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSTSEVNEVETDGQLDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKEAANATLPNFSFLDSGNFVTVNHEYASMAEDDRDPAESGSHDNLESPRTQNLYAYFSDAKCRAAVQLLLIQAVLEIYNMYRTQLSAKTILVLFEALRDVALHAHKINSNIILRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLVVDRPTSYEEVEVETRLIRLCQEVLEFYIEVAGSGTVSESSHGKQLHWLIPLGSGKRRELAARAPLVVTTLQAICNLGEISFEKNLAHFFPLLSSLISCEHGSAEVQVALSDMLSLSVGPLLLRSC* 1785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2212 1784 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 216 IPR032629 -
Gso9g2212 1784 ProSiteProfiles SEC7 domain profile. 609 796 IPR000904 GO:0005085|GO:0032012
Gso9g2212 1784 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 8 1777 - -
Gso9g2212 1784 SUPERFAMILY ARM repeat 408 1506 IPR016024 -
Gso9g2212 1784 MobiDBLite consensus disorder prediction 1306 1338 - -
Gso9g2212 1784 Gene3D - 691 811 IPR023394 -
Gso9g2212 1784 Pfam Domain of unknown function (DUF1981) 1167 1249 IPR015403 -
Gso9g2212 1784 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 345 503 IPR032691 -
Gso9g2212 1784 Pfam C-terminal region of Mon2 protein 1348 1426 IPR032817 -
Gso9g2212 1784 SMART sec7_5 613 798 IPR000904 GO:0005085|GO:0032012
Gso9g2212 1784 Pfam BIG2 C-terminal domain 1575 1773 IPR046455 -
Gso9g2212 1784 MobiDBLite consensus disorder prediction 42 73 - -
Gso9g2212 1784 Gene3D - 609 690 - -
Gso9g2212 1784 SUPERFAMILY Sec7 domain 613 804 IPR035999 GO:0005085|GO:0032012
Gso9g2212 1784 Pfam Sec7 domain 617 798 IPR000904 GO:0005085|GO:0032012
Gso9g2212 1784 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 8 1777 - -
Gso9g2212 1784 MobiDBLite consensus disorder prediction 581 601 - -
Gso9g2212 1784 CDD Sec7 616 798 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2212 Gso-Chr9 46469985 46481200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2212 K18442 - gmx:100789988 3466.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2063 18 53579069 53590294 Gso9g2212 9 46469985 46481200 GST
Gso9g2212 9 46469985 46481200 Gso1g1225 1 48308545 48321312 PCT
Gso9g2212 9 46469985 46481200 Gso3g0182 3 2397084 2407755 PCT
Gso1g1225 1 48308545 48321312 Gso9g2212 9 46469985 46481200 PCT
Gso3g0182 3 2397084 2407755 Gso9g2212 9 46469985 46481200 PCT