Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0182 ATGGCTTCTTCGGAAGCCGATTCCCGGCTGAGTCAGGTCGTGGTTCCCGCGCTCGAGAAGATCGTCAAGAACGCGTCGTGGCGGAAGCACGCGAAGCTCGCGCACGAGTGCAAATCGGTGATCGAGAGCCTCAGCCACCAGCAAGCGCCGCCGCCGCCGGGATCTCCTTCGGATACCGAACCGGAAACCGCCGTCCCCGGCCCGCTCCAGGATGGCAGTCCGGTGGAATTCTCGCTCGCGGAGTCGGAGTCCATCCTCGCGCCGCTCATCAATGCCGCCGTCTCCGGCGTCCTCAAGATCGCCGATCCCGCCGTCGACGCCATCCAGAAGCTCATTGCGCACGGCTACCTCCGCGGCGAGGCGGACCCGGCCTCCTCCGGCGCCGCGGCGCCGGAGGCCAAGCTCCTCTCCAGCCTAATCGAATCGGTTTGCAAATGCCACGATTTTGGCGACGATGCGATGGAATTGCTCGTCCTCAAAACCTTACTCTCCGCTGTGACGTCGATTTCTCTGCGAATCCACGGCGATTCGTTGCTCCTAATAGTGCGAACGTGCTACGACATATATTTGGTCAGCAAAAACATTGTGAATCAAACAACGGCGAAGGCGTCGTTGATTCAGATTTTGGTGATCGTGTTCCGGAGAATGGAAGCCGATTCCTCCACCGTTCCGATTCAGCCAATTGTGGTGGCGGAATTGATGGAGCCAGTGGAGAAATCCGACGTGGACATTTCGATGACGCAGTACGTGCAGGGTTTCATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGACGCCGAGTGGGAAGGTTAGTTTATTAGGTGGACACGACGGTGCGTTTGAGACTACCACGGTTGAGACTACGAACCCTACTGATTTGTTGGATTCCACTGATAAGGACATGTTGGATGCGAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTGGAAGGAAGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTCGAGGTTCAGATTGGGAACAAGTTGAGGAGGGATGCTTTCTTGGTGTTTAGGGCGCTCTGTAAGCTTTCAATGAAGACGCCGCCGAAGGAAGCCTTGGGGGACCCGCAGCTGATGAAGGGGAAGATTGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGTGCTGTGTTCAGGACTAGTGTGAGGTTTTTAGGCGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTGATTGTGTTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAGGCAGAAATTGGAGTTTTTTTCCCTATGATTGTTCTCAGGGTCCTAGAGAATGTTTCTCAACCTAATTTTCAGCAGAAGATTATAGTGCTTCGATTTCTGGATAAGCTTTGTGTTGATTCACAGATATTGGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAATATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACGACCACACTTTTGCCACCTCAAGAAGCAACACTAAAACTTGAGGCCATGAAAAGCTTGGTTTCCGTTCTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTGCTGAGCCTCATTCAGCTAAGAAAGTTGAAGCAACATATAATAGCCCTGAAAGTGGAGGTTTTACCATGGTAAATGGGAATGGAGAAGACCCTGTTGATGGATCTGACTCCCAATTGGAAGTCTCCAATGATGCATCTGATGTTTCAACTATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAGTTATCCTTGAAGGTAATGCATGCCTATGTGGATTCTTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTCAGACTGCCTGGTGAGGCGCAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGATACAGCATATGTCCTTGCCTATTCTGTTATAATGCTCAATACAGATGCTCACAATCCTATGGTGAAGAATAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATTTGCCAGAGGAATACTTGAGGTCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGCGGCTCCTCAACAAAAACAGACTGTGAACCCTAATAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACGTGGGGAAGAGAATATGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAGTTCAAAGAAAAAGCTCGCAAAACGGAGTCAATCTATTATGCAGCAACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGTTGGGCACCGATGTTGGCAGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAGGTTGTAATATCCCTGTGTCTTGAAGGCTTCCGCTATGCTATTCACGTTACTTCTGTAATGTCGATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTCGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAACGTATCTTGACTTGTGTTTCCCGGTTTGAGCATCTACATCTTCTTGGGGAGGGGGCTCCACCAGATGCCACATTCTTTTCCTTTCCTCAGAATGATTTAGAAAAAACAAAGCCAGCAAAATCAACCATTCTTCCGGTTTTGAAGAAGGGACCTGGGAGGATGCAGTATGCAGCTGCTACTTTGATGCGGGGTTCATATGATAGTGCTGGAATTGGCAGTAATGGTTCTGGTGTCACATCAGAACAGGTGAACAATCTAGTCTCTAATTTAAATATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATGGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGCTGTTTGACAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGCTGGCCAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTTATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTAATTATCAGATGTGTCTCTCAAATGGTTCTGTCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGTATGTTCATGGTATTCACAGCAGCAGCTTATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATGGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGACTGTGTGAATTGCCTAATTGCATTCACCAATAGTAGATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGTGCTACAAAACTAGCTGCAGGAGACCTTGGCTCATCATCAAGAAATAAGGATAAGGAAGTTACTGGAAAGATTTCTTCATCTTCACCTCAAACAAGAAAGGAGGGGAAAAAAGATAATGGAGAGGTGACTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTCGACCCAAGACCTGAGATTAGGAAGAGTGCGTTGGAAGTCCTGTTTGAAACCTTACGTAACCATGGGCATCTCTTTTCACTACCTTTATGGGAAAGAGTATTTGAGTCTATCCTATTTCCTATATTCGATTATGTTCGACATTCTATTGATCCTTCAGGGAGTAGTTCACCGGTCAATGAAGTAGAGGCTGATGGTGAGCTTGATCAAGATGCTTGGCTTTACGAGACATGCACATTGGCTCTCCAGTTGGTTGTAGATCTTTTTGTTAACTTTTATGACACTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTTAGCTTTATAAAGCGTCCTCATCAAAGCCTTGCTGGCATTGGTATTGCTGCCTTTATTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAAAAGTGGTTGGAAGTGGTTTTCTCAGTAAAAGAAGCAGCAAATGCAACACTTCCTAAATTTTTGTTTGTTGAAAGTGAGAACTTCACTAGAAATTACGAGCATGCTTCAACAGCTGAAGATGATAGAGATCCTGCCGAGTCTGGCTCCCCAGATAATTTAGAAACCATGAGGATTCGTCGTCTTTATGCTCATTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTATCGAACTCACCTTTCAGCAAAAGCCACGCTAGTCCTGTTTGATGCTTTGCACGATGTAGCAGTACACGCGCACCAGATTAACGGCAATACTATATTACGATCAAAGCTTCAAGAATTTGGTTCTGTGACCCAAATGCAAGACCCTCCACTGTTACGCCTTGAGAATGAATCGTACCAGACCTGCCTTACATTTTTACAAAACCTTGTCATTGACAAGCCTCCTAGTTACGAGGCGGATGAGGTTGAATTGCATCTCATTCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGGACAAAAATCTGAATCTTCTCATGGTAGACAGCAACATTGGTCAATTCCCTTAGGCACTGGGAAGAGGAGAGAATTGGCAGCACGATCGCCTCTCATTGTGGCTACTATTCAGGCTATTTGTAGTTTGGGAGATACTTCTTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTCATCTCCAGCTTGGTACGTTGTGAACATGGGTCAAAGGATCTCCAGGTTGCTCTCAGCGATATGCTTAGTTTATCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5352 0.4417 MASSEADSRLSQVVVPALEKIVKNASWRKHAKLAHECKSVIESLSHQQAPPPPGSPSDTEPETAVPGPLQDGSPVEFSLAESESILAPLINAAVSGVLKIADPAVDAIQKLIAHGYLRGEADPASSGAAAPEAKLLSSLIESVCKCHDFGDDAMELLVLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLVSKNIVNQTTAKASLIQILVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDISMTQYVQGFITKIMQDIDGVLNPTTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDFEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALGDPQLMKGKIVALELLKILLENAGAVFRTSVRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKIIVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLEAMKSLVSVLKSMGDWMNKQLRIAEPHSAKKVEATYNSPESGGFTMVNGNGEDPVDGSDSQLEVSNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRSLFERISRNEIKMKENDAAPQQKQTVNPNRLLGLDSILNIVIRKRGEENMETSDDLIRHMQEQFKEKARKTESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWERILTCVSRFEHLHLLGEGAPPDATFFSFPQNDLEKTKPAKSTILPVLKKGPGRMQYAAATLMRGSYDSAGIGSNGSGVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKMVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCLTNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTAAAYDDHKNIVLLAFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNKDKEVTGKISSSSPQTRKEGKKDNGEVTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNHGHLFSLPLWERVFESILFPIFDYVRHSIDPSGSSSPVNEVEADGELDQDAWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFIRLMSNAGELFSDEKWLEVVFSVKEAANATLPKFLFVESENFTRNYEHASTAEDDRDPAESGSPDNLETMRIRRLYAHLTDAKCRAAVQLLLIQAVMEIYNMYRTHLSAKATLVLFDALHDVAVHAHQINGNTILRSKLQEFGSVTQMQDPPLLRLENESYQTCLTFLQNLVIDKPPSYEADEVELHLIRLCQEVLEFYIEVAGFGQKSESSHGRQQHWSIPLGTGKRRELAARSPLIVATIQAICSLGDTSFEKNLSHFFPLISSLVRCEHGSKDLQVALSDMLSLSVGPVLLQSC* 1784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0182 1783 Gene3D - 612 693 - -
Gso3g0182 1783 SUPERFAMILY ARM repeat 384 1512 IPR016024 -
Gso3g0182 1783 ProSiteProfiles SEC7 domain profile. 612 799 IPR000904 GO:0005085|GO:0032012
Gso3g0182 1783 MobiDBLite consensus disorder prediction 40 73 - -
Gso3g0182 1783 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1776 - -
Gso3g0182 1783 MobiDBLite consensus disorder prediction 1306 1338 - -
Gso3g0182 1783 Pfam C-terminal region of Mon2 protein 1348 1426 IPR032817 -
Gso3g0182 1783 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1776 - -
Gso3g0182 1783 SUPERFAMILY Sec7 domain 616 807 IPR035999 GO:0005085|GO:0032012
Gso3g0182 1783 Pfam Domain of unknown function (DUF1981) 1167 1249 IPR015403 -
Gso3g0182 1783 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 219 IPR032629 -
Gso3g0182 1783 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
Gso3g0182 1783 Gene3D - 694 814 IPR023394 -
Gso3g0182 1783 CDD Sec7 619 801 IPR000904 GO:0005085|GO:0032012
Gso3g0182 1783 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Gso3g0182 1783 Pfam BIG2 C-terminal domain 1574 1772 IPR046455 -
Gso3g0182 1783 Pfam Sec7 domain 620 801 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0182 Gso-Chr3 2397084 2407755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0182 K18442 - gmx:100783833 3447.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1225 1 48308545 48321312 Gso3g0182 3 2397084 2407755 GST
Gso18g2063 18 53579069 53590294 Gso3g0182 3 2397084 2407755 PCT
Gso9g2212 9 46469985 46481200 Gso3g0182 3 2397084 2407755 PCT
Gso3g0182 3 2397084 2407755 Gso18g2063 18 53579069 53590294 PCT
Gso3g0182 3 2397084 2407755 Gso9g2212 9 46469985 46481200 PCT