Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1225 ATGGTTACTTTCTTCGATCGAGAGACATTGCATTTTCAACAAAAATCGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGCGCTTCAACTCTTTTGATTGTGTTTCAGCTGTCATGCTCCATTTTTATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAGGCAGAAATTGGGGTTTTTTTCCCTATGATTGTTCTGAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGACAGTGCTTCGATTTCTGGATAAGCTTTGTGTTGATTCACAGATATTGGTTGACATATTTATCAACTATGACTGTGATGTCAATTCATCAAATATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAATGACCACACTTTTGCCACCTCAAGAAGCAACATTAAAACTTGAGGCCATGAAAAGCTTGGTTGCCGTTCTAAAATCAATGGGAGACTGGATGAACAAACAATTGCGCATTCCTGACCCTCATTCAGCCAAGAAAGTTGAAGCAACAGATAATAGCCCTGAAAGTGGAGGTTTTACCATGGTAAATGGGAATGGGGAAGACCCTGTTGATGGTTCTGACTCCCAATCGGAAGTCTCCAATGATGCATCTGATGTTTCAACTATTGAGCAGCGACGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTGATCAATGCCAAGAAGGTGGGTGATTCGCCAGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAGTTATCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTTCTTCAAGGATTCAGACTGCCTGGTGAGGCGCAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACTGCATATGTCCTAGCCTATTCTGTTATAATGCTTAATACAGATGCTCACAATCCTATGGTGAAGAATAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATTTGCCTGAGGAATACTTGAGGGCCTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATGTGGCTCCTCAACAAAAACAGGCTGTGAACCCTAATAGACTTTCAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACGCGGGGAAGGGAACATGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAATCTGAGTCAATCTATTATGCAGCAACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGTTGGGCACCGATGTTAGTCGCTTTCAGTGTTCCTCTTGATCGAAGTGATGATGAGGTTGTAATATCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTAATGTCGATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAAAATGTCGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAACATATCTTGACTTGTGTTTCCCGGTTTGAGCATCTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCCTTTCCTCAGAATGATTCAGAAAAAACAAAGCCGGCAAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGACCTGGGAGGATGCAGTATGCAGCTGCTACTTTGATGCGGGGTTCATATGATAGTGCTGGAATTGGCAGTAATGGTTCTGGTGTCACATCAGAACAGGTGAACAATCTAGTCTCTAATTTAAATATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGCCAGAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGCTGTTCGGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAACTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTTATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAACTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCTGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTATGATGACCACAAAAACATTGTACTCTTATCTTTTGAAATTATGGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGACTGTGTGAATTGCCTAATTGCGTTCACCAATAGTAGATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTTCGGTTCTGTGCAACAAAACTAGCAGCAGGAGACCTTGGCTCATCATCAAGGAATAAGGATAAGGAAGTTACTGGAAAGATTTCTTCATCTTCACCTCAAACAGGAAAGGAGGGGAAAAAAGATAACGGAGAGGTGATTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGAAGTCCTGTTTGAAACCTTACGTAACCATGGGCATCTTTTTTCACTACCTTTATGGGAAAGAGTATTTGAGTCTATCCTATTTCCTATATTCGATTATGTTCGGCATTCTATTGATCCTTCAGGGAGTAGTTCACCGATCAATGAAGTAGAGGCTGATGGTGAGCTTGATCAAGATGCTTGGCTTTACGAAACATGCACATTGGCTCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTATGACACTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTTAGCTTTATAAAGCGCCCTCATCAAAGCCTTGCTGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGTAGCAAATGCAACACTTCCTAACTTTCTGTTTGTTGAAAGTGAGGACTTTACTAAAAATCAGGAACATGCTTCAACAGCTGAAGATGATAGAGATCGTGCCGAGTCTGGCTCCCCAGATAATTTAGAAAGCTTGAGGATTCGTCGTCTTTATGCTCATTTAGCTGACGCAAAATGCCGAGCTGCTGTTCAACTTTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTATCGCCCTCACCTTTCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTCTGCACGATGTTGCGATACATGCACACCAGATTAACGGCAATACTATGTTACGTTCAAAGCTTCAAGAGTTTGGTTCTGTGACCCAAATGCAAGACCCTCCACTGTTACGCCTCGAGAATGAATCGTACCAGACCTGCCTTACATTTTTACAAAACCTTGTCATTGACAAGCCTCCTAGTTACAAGGTGGATGAGGTTGAATCACATCTCATCCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGGTTTTGAACAAAAATCTGAATCTTCTCATGGTAGACAGCAACACTGGTTGATTCCCTTAGGCACTGGGAAGAGGAGAGAATTGGCTGCACGTTCACCTCTCATTGTGGCTACTCTGCAGGCTATTTGTAGTTTGGGAGATACTTCTTTTGAGAAGAACTTGTCTCATTTCTTCCCTCTCATTTCTAGCTTGGTACGTTGTGAACATGGGTCAAAGGATGTCCAGGTTGCTCTCAGTGACATGCTTAGTTTATCAGTTGGTCCTATTTTGTTACAGTCATGTTGA 4194 0.4063 MVTFFDRETLHFQQKSFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMTVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVMTTLLPPQEATLKLEAMKSLVAVLKSMGDWMNKQLRIPDPHSAKKVEATDNSPESGGFTMVNGNGEDPVDGSDSQSEVSNDASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINAKKVGDSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEYLRALFERISRNEIKMKENDVAPQQKQAVNPNRLSGLDSILNIVIRKRGEGNMETSDDLIRHMQEQFKEKARKSESIYYAATDVVILRFMIEVCWAPMLVAFSVPLDRSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKPAKSTILPVLKKKGPGRMQYAAATLMRGSYDSAGIGSNGSGVTSEQVNNLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLSFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNKDKEVTGKISSSSPQTGKEGKKDNGEVIDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNHGHLFSLPLWERVFESILFPIFDYVRHSIDPSGSSSPINEVEADGELDQDAWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEVANATLPNFLFVESEDFTKNQEHASTAEDDRDRAESGSPDNLESLRIRRLYAHLADAKCRAAVQLLLIQAVMEIYNMYRPHLSAKAMLVLFDALHDVAIHAHQINGNTMLRSKLQEFGSVTQMQDPPLLRLENESYQTCLTFLQNLVIDKPPSYKVDEVESHLIRLCQEVLEFYIEVAGFEQKSESSHGRQQHWLIPLGTGKRRELAARSPLIVATLQAICSLGDTSFEKNLSHFFPLISSLVRCEHGSKDVQVALSDMLSLSVGPILLQSC* 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1225 1397 MobiDBLite consensus disorder prediction 173 224 - -
Gso1g1225 1397 MobiDBLite consensus disorder prediction 920 950 - -
Gso1g1225 1397 Pfam C-terminal region of Mon2 protein 962 1040 IPR032817 -
Gso1g1225 1397 Pfam Sec7 domain 233 414 IPR000904 GO:0005085|GO:0032012
Gso1g1225 1397 SUPERFAMILY Sec7 domain 229 420 IPR035999 GO:0005085|GO:0032012
Gso1g1225 1397 MobiDBLite consensus disorder prediction 1146 1165 - -
Gso1g1225 1397 MobiDBLite consensus disorder prediction 206 224 - -
Gso1g1225 1397 CDD Sec7 232 414 IPR000904 GO:0005085|GO:0032012
Gso1g1225 1397 Pfam BIG2 C-terminal domain 1188 1386 IPR046455 -
Gso1g1225 1397 ProSiteProfiles SEC7 domain profile. 225 412 IPR000904 GO:0005085|GO:0032012
Gso1g1225 1397 Pfam Domain of unknown function (DUF1981) 781 863 IPR015403 -
Gso1g1225 1397 Gene3D - 225 306 - -
Gso1g1225 1397 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 13 1390 - -
Gso1g1225 1397 SMART sec7_5 229 414 IPR000904 GO:0005085|GO:0032012
Gso1g1225 1397 MobiDBLite consensus disorder prediction 1146 1164 - -
Gso1g1225 1397 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 12 119 IPR032691 -
Gso1g1225 1397 SUPERFAMILY ARM repeat 26 1127 IPR016024 -
Gso1g1225 1397 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 13 1390 - -
Gso1g1225 1397 Gene3D - 307 427 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1225 Gso-Chr1 48308545 48321312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1225 K18442 - gmx:100798955 2710.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1225 1 48308545 48321312 Gso3g0182 3 2397084 2407755 GST
Gso18g2063 18 53579069 53590294 Gso1g1225 1 48308545 48321312 PCT
Gso9g2212 9 46469985 46481200 Gso1g1225 1 48308545 48321312 PCT
Gso1g1225 1 48308545 48321312 Gso18g2063 18 53579069 53590294 PCT
Gso1g1225 1 48308545 48321312 Gso9g2212 9 46469985 46481200 PCT