Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2145 ATGGCCAAGGAAGATGTGTTTGAGTTCCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCTGTAAGGAAGATATCTGAGCTTGTGATTCTCAAACACTATGAGCCGGGAGAGTATGTTGTTCGTGAGGGAGAACGTGGGGATGGTCTTTACTTCATCTGGGAGGGAGAGGCTGAGGTTGTTGGCTCTGTTAATGCTGACGATGATAATCATCCAGAGTTTCAATTGAAAAGATTTGACTATTTTGGTTTTGGTTTATCAAATGAAGTTCACCATGCTGATGTTGTAGCTTTGACAAAGCTATCATGCTTGGTGCTGCCCCATGAGCACTCAGCATTGCTGCAGCCAAAGTCTATTTGGAGTGCAGAAAAATCTCATGATACATGCTCACTTGTGGAGCATATATTGCATTTGGACCCTATAGAGGTAGACATCTTCCGAGGAATCACTCCTCCAGATGCTCCAACATTTGGGAAGGTATTTGGTGGACAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCGTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATCAAGTTAAGCGTCTCCGTGATGGGAAGAGTTTTGCTACAAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGTTGGCTTCATTTCATAAGGAAGAAGTAGGGTTTCACCACCAGGAAGTGTCTATCCCATCAGTCCCTGCTCCAGATACGCTTTTATCGTTGGAAGAGCTTCGGGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTACCGGAACAAGGTTGCTACAATTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAAAATTTCAACAAATCAGACCAAATCTCCTCCTAGTTTGAGATACTGGTTTAGAGCAAGGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTAGCATATACATCAGATCTAATCTTCCTTCAAGTGAGTTTGAACCCCAACCGTAGGAAGGGAAGGAAGGCTCGTGCTGTGAGTCTGGACCACTCCATGTGGTTTCACAGACCTTTAAGAGCTGATGATTGGATACTATTTGTGATCTTTAGTCCTACTGCCAATAATGCCCGCGGCTATGTCACTGGCCAAATGTTCAATCAGAAGGGAGAGCATCTTGTGTCTGTGGTTCAAGAAGGTGTAATGAGGGAAGTTATTTCTGCTAAGTCAGCCATCAAATCTAATCTATGA 1290 0.4372 MAKEDVFEFLGNVPLLQRLPGSSVRKISELVILKHYEPGEYVVREGERGDGLYFIWEGEAEVVGSVNADDDNHPEFQLKRFDYFGFGLSNEVHHADVVALTKLSCLVLPHEHSALLQPKSIWSAEKSHDTCSLVEHILHLDPIEVDIFRGITPPDAPTFGKVFGGQIVGQALAAASKSVDCRKVVHSLHVYFLLVGDFNIPIIYQVKRLRDGKSFATRKVDAIQKGNVIFTLLASFHKEEVGFHHQEVSIPSVPAPDTLLSLEELREQRLTDPRLPRTYRNKVATIEFIPWPIEIRFCEPKISTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGRKARAVSLDHSMWFHRPLRADDWILFVIFSPTANNARGYVTGQMFNQKGEHLVSVVQEGVMREVISAKSAIKSNL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2145 429 SMART cnmp_10 15 132 IPR000595 -
Gso9g2145 429 CDD Thioesterase_II_repeat1 313 415 - -
Gso9g2145 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Gso9g2145 429 SUPERFAMILY cAMP-binding domain-like 6 112 IPR018490 -
Gso9g2145 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Gso9g2145 429 PANTHER ACYL-COA THIOESTERASE 51 429 IPR003703 GO:0006637|GO:0047617
Gso9g2145 429 Gene3D - 129 418 IPR042171 -
Gso9g2145 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 240 IPR029069 -
Gso9g2145 429 Pfam Thioesterase-like superfamily 160 415 - -
Gso9g2145 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Gso9g2145 429 CDD CAP_ED 15 112 IPR000595 -
Gso9g2145 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 416 IPR029069 -
Gso9g2145 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Gso9g2145 429 CDD Thioesterase_II_repeat2 146 238 - -
Gso9g2145 429 PANTHER ACYL-COA THIOESTERASE 51 429 - -
Gso9g2145 429 Gene3D Jelly Rolls 2 123 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2145 Gso-Chr9 45732539 45739938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2145 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 67.832 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2145 K01068 - gmx:100813197 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1976 18 52333085 52340530 Gso9g2145 9 45732539 45739938 GST
Gso9g2145 9 45732539 45739938 Gso7g0621 7 6630505 6638144 PCT
Gso9g2145 9 45732539 45739938 Gso3g0087 3 965013 974096 PCT
Gso7g0621 7 6630505 6638144 Gso9g2145 9 45732539 45739938 PCT
Gso3g0087 3 965013 974096 Gso9g2145 9 45732539 45739938 PCT