Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0621 ATGGAATTGCATTGCTCCGTGAAAAAATTGGAAAACGAGAAAGCGTTTGAGTTTCTCGGAGGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTCTGAGGAAGATAGCTCAACTTGTGGATGTCAAACACTGTGAGCCAGGAGAGTATGTTGTTCGCGAGGGTGAACCTGGAGATGGCGTGTACTTCATATTGGATGGAGAGGCTGAGGTTCTTGGATCTGCTAGGGCCAATGATGAAAATCGACCAGAGTTCCAATTGAAACAATATGATTACTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAGCTCACATGCTTAGTGCTTCCCCATGTGCACTCAACACTGCTGCAGCCAAAGTCTATCTGGAGAGCAGAAAATTCTCTCGAGACATGCTCACCTGTGGAGAATATATTGCATTTGGAGCCCCTTGAGGTAGATATCTTCCAAGGAGTTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATTGGACAGGCACTGGCTGCAGCTTCAAAATCTGTTGACTGTCTTAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGGGATTTAAACATGCCAATTACATATCAAATTCACCGTCTCCGTGATGGAAAGAGCTTCGCTTCAAGGAAAGTGGATGGAATTCAAAAGGGAAATGTCATATTCACTCTGATGGCTTCATTTCAAAAAGAAGAATCAGGGATGGTCCACCAAGAAGTAGCTATACCATCTGTCCCTGCTCCAGATAAGCTTCTGCCGATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTATCGGAACAAAGTAGCTACATCTCAATTCATCCCATGGCCCATAGAGATACGATTATGTGAATATGAAACTGCAACAAATATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCCAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTGGACCACTCTATGTGGTTTCACCGATCCGTAAAAGCTGATGAATGGGTGCTATTTGCGATCTTTACTCCTAGTGCCCATAGTGCACGTGTCTTTGTCACCGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGACTAGCCAGGAAAATTAATCCCGGAAATTCAGCCATTAAATCTATGTTATGA 1317 0.4419 MELHCSVKKLENEKAFEFLGGVPLLQRLPSSSLRKIAQLVDVKHCEPGEYVVREGEPGDGVYFILDGEAEVLGSARANDENRPEFQLKQYDYFGYGLSNTVHQADVVALSKLTCLVLPHVHSTLLQPKSIWRAENSLETCSPVENILHLEPLEVDIFQGVTLPDAPRFGKVFGGQMIGQALAAASKSVDCLKVVHSLHAYFILAGDLNMPITYQIHRLRDGKSFASRKVDGIQKGNVIFTLMASFQKEESGMVHQEVAIPSVPAPDKLLPMEELRERRLTDPRLPITYRNKVATSQFIPWPIEIRLCEYETATNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVKADEWVLFAIFTPSAHSARVFVTGQMFNQKGELLVSLVQEGLARKINPGNSAIKSML* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0621 438 Pfam Thioesterase-like superfamily 170 423 - -
Gso7g0621 438 CDD Thioesterase_II_repeat2 155 247 - -
Gso7g0621 438 ProSiteProfiles cAMP/cGMP binding motif profile. 24 94 IPR000595 -
Gso7g0621 438 Pfam Cyclic nucleotide-binding domain 43 119 IPR000595 -
Gso7g0621 438 Gene3D Jelly Rolls 5 133 IPR014710 -
Gso7g0621 438 TIGRFAM tesB: acyl-CoA thioesterase II 147 425 IPR003703 GO:0006637|GO:0047617
Gso7g0621 438 SUPERFAMILY cAMP-binding domain-like 15 119 IPR018490 -
Gso7g0621 438 CDD Thioesterase_II_repeat1 322 423 - -
Gso7g0621 438 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 426 IPR029069 -
Gso7g0621 438 PANTHER ACYL-COA THIOESTERASE 60 438 - -
Gso7g0621 438 CDD CAP_ED 24 119 IPR000595 -
Gso7g0621 438 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 51 67 IPR018488 -
Gso7g0621 438 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 139 251 IPR029069 -
Gso7g0621 438 Gene3D - 138 427 IPR042171 -
Gso7g0621 438 PANTHER ACYL-COA THIOESTERASE 60 438 IPR003703 GO:0006637|GO:0047617
Gso7g0621 438 SMART cnmp_10 24 141 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0621 Gso-Chr7 6630505 6638144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0621 10 438 Acyl Lipid Metabolism Gene Families AT1G01710 64.569 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0621 K01068 - gmx:100797680 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0621 7 6630505 6638144 Gso7g0621 7 6630505 6638144 ECH
Gso7g0621 7 6630505 6638144 Gso3g0087 3 965013 974096 GST
Gso18g1976 18 52333085 52340530 Gso7g0621 7 6630505 6638144 PCT
Gso9g2145 9 45732539 45739938 Gso7g0621 7 6630505 6638144 PCT
Gso7g0621 7 6630505 6638144 Gso18g1976 18 52333085 52340530 PCT
Gso7g0621 7 6630505 6638144 Gso9g2145 9 45732539 45739938 PCT