Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2135 ATGGTTTCACTCGGAGCTACCTGTGCTTTGTGCTGTTCTGTGTTGATTGTGTTTGTCACTTTGAGTTCGGCTGGGGACATAGTGCACCCTGATAGTATTGCTCCCAGAAGGCCTGGCTGTGACAACAACTTTGTCCTGGTTAAAGTCCCTACTTGGATTGATGGTGTGGAAAGCTTTGAGTATGTTGGCGTTGGTGCAAGATTTGGCCCTACATTAGAATCAAAAGAAAAACATGCTAACCATACTAGAGTTGCGATTGCGGACCCTCCTGATTGTTGTAGCAAGCCTAATAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAATCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATCGTACAGAACTTTTCAAGATGGTTTGTGAAGCAAATGAAACTGATGTTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGTGAAAACTTGAAAAATCACATACTAAACAATTCAGTAGTGTCGGTGCAGTTGTATTCTCCATTGCGTCCATTGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTTTGTGCTTCTTACTGGTCTGCCTGGTCAGCAAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATACGTAAATGCAGAGAATGCTGGTTCTAGTGCATATGTGGAAATCAGTACTGCAGCAGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTAATGGCATATTGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTGTTGTCATGTTTCAAATGGTTCCAGCATGCTGCACAAACATTTGTTAAAGTACCCTTCTTCGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATTGTGTTTGCTGTGCTTTGGGGAATTTATCGCCGTGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGCATCACATTGATAATCACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATACGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAGGAGTGGAGAAGATGGTATCCCTATGCTACTCAAGATACCACGTATGTTTGATCCTTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATCATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGAGATGGGTACTTCTTGTGGGCAATGACCGCTTATGGTTTAGGTCTCCTTATCACATACGTGGCTTTGAACTTAATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGGAACCTTTCTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGGATCAATCAACAAACCAGTAA 1620 0.4259 MVSLGATCALCCSVLIVFVTLSSAGDIVHPDSIAPRRPGCDNNFVLVKVPTWIDGVESFEYVGVGARFGPTLESKEKHANHTRVAIADPPDCCSKPNNKLTGEIILVHRGQCSFTIKANIAEEAGASAILIINYRTELFKMVCEANETDVDIGIPAVMLPQDAGENLKNHILNNSVVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSARESAIEQEKLLKDASDEYVNAENAGSSAYVEISTAAAISFVVIASCFLVMLYKLMAYWFVEVLVVLFCIGGVEGLQTCLVALLSCFKWFQHAAQTFVKVPFFGAVSYLTVAVTPFCIVFAVLWGIYRRVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQEDQSTNQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2135 539 Pfam Signal peptide peptidase 243 523 IPR007369 GO:0004190|GO:0016021
Gso9g2135 539 SUPERFAMILY PA domain 98 139 IPR046450 -
Gso9g2135 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 536 IPR007369 GO:0004190|GO:0016021
Gso9g2135 539 Coils Coil 219 239 - -
Gso9g2135 539 Pfam PA domain 90 167 IPR003137 -
Gso9g2135 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 536 - -
Gso9g2135 539 Gene3D - 42 184 - -
Gso9g2135 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2135 Gso-Chr9 45632310 45639708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2135 K09597 - gmx:100809976 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1967 18 52177401 52184586 Gso9g2135 9 45632310 45639708 GST
Gso9g2135 9 45632310 45639708 Gso7g0609 7 6473457 6482218 PCT
Gso9g2135 9 45632310 45639708 Gso3g0077 3 828598 836543 PCT
Gso7g0609 7 6473457 6482218 Gso9g2135 9 45632310 45639708 PCT
Gso3g0077 3 828598 836543 Gso9g2135 9 45632310 45639708 PCT