Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1967 ATGGTTTCACTTGGAGCTACCTGTGCTCTGTGCTGTTCTATGTTCATGGTGTTTGTCACTTTGAGTTTGGCTGGGGACATAGTACACCCTGATAGTATTGCTCCCAGAAGGCCTGGCTGTGACAACAACTTTGTCCTGGTTAAAGTCCCTACTTGGATTGATGGTGTGGAAAGCTGTGAGTATGTTGGCGTTGGTGCAAGATTTGGCCCTACATTAGAATCAAAAGAAAAACATGCTAACCATACTAGAGTTGCGATAGCGGACCCTCCTGATTGTTGTAGCAAGCCTAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATCGTACAGAACTTTTCAAGATGGTTTGTGAAGCGAATGAAACTGATGTTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGTGAAAACTTGAAAAATCACATACTAAACAATTCAGTAGTGTCGGTGCAGTTGTATTCTCCACTGCGTCCATTGGTTGATGTTGCAGAAGTGTTTTTATGGCTTATGGCTGTCGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCAAGAGAGTCTGCCATTGAGCAGGAGAAGCTATTAAAGGATGCTTCAGATGAATACATAAATGCAGAGAATGCTGGTTCTAGTGCATATGTGGAAATCAGTACTGCAGCGGCAATATCATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAATTAATGGCATATTGGTTTGTTGAAGTTCTGGTGGTTTTATTTTGCATTGGTGGGGTTGAGGGACTACAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAAATGGTTCCAGCATGCTGCACAAACATTTGTGAAAGTACCTTTCTTTGGTGCTGTATCATATCTGACAGTTGCTGTTACTCCCTTCTGCATTGTGTTTGCTGTGCTTTGGGGAGTTTATCGCCGTGTATCATTTGCTTGGATTGGTCAAGATATTCTTGGCATCACATTGATAATTACAGTTCTTCAGATTGTGCGGATACCAAATCTCAAGGTCGGAACTGTTCTTCTCAGTTGTGCCTTCCTATACGACATCTTCTGGGTGTTTGTCTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAGGAGTGGAGAAGATGGTATCCCTATGCTACTCAAGATACCACGTATGTTTGATCCCTGGGGTGGTTACAGCATCATTGGTTTTGGGGACATCATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGAGATGGGTACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTATCACATACGTGGCTTTGAACTTAATGGATGGACATGGTCAACCAGCTTTGCTTTATATAGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGGTTTTATGGACAAGAGGGGAACCAAAAATACCTTGCCCTCACATCCAAGAGAATCAATCAACAAACCAGTAA 1620 0.4259 MVSLGATCALCCSMFMVFVTLSLAGDIVHPDSIAPRRPGCDNNFVLVKVPTWIDGVESCEYVGVGARFGPTLESKEKHANHTRVAIADPPDCCSKPKNKLTGEIILVHRGQCSFTTKANIAEEAGASAILIINYRTELFKMVCEANETDVDIGIPAVMLPQDAGENLKNHILNNSVVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTARESAIEQEKLLKDASDEYINAENAGSSAYVEISTAAAISFVVIASCFLVMLYKLMAYWFVEVLVVLFCIGGVEGLQTCLVALLSCFKWFQHAAQTFVKVPFFGAVSYLTVAVTPFCIVFAVLWGVYRRVSFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRDGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKVLWTRGEPKIPCPHIQENQSTNQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1967 539 Pfam PA domain 90 167 IPR003137 -
Gso18g1967 539 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 537 IPR007369 GO:0004190|GO:0016021
Gso18g1967 539 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 537 - -
Gso18g1967 539 Gene3D - 41 184 - -
Gso18g1967 539 Coils Coil 219 239 - -
Gso18g1967 539 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Gso18g1967 539 Pfam Signal peptide peptidase 243 523 IPR007369 GO:0004190|GO:0016021
Gso18g1967 539 SUPERFAMILY PA domain 99 139 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1967 Gso-Chr18 52177401 52184586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1967 K09597 - gmx:100808921 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1967 18 52177401 52184586 Gso9g2135 9 45632310 45639708 GST
Gso18g1967 18 52177401 52184586 Gso7g0609 7 6473457 6482218 PCT
Gso18g1967 18 52177401 52184586 Gso3g0077 3 828598 836543 PCT
Gso7g0609 7 6473457 6482218 Gso18g1967 18 52177401 52184586 PCT
Gso3g0077 3 828598 836543 Gso18g1967 18 52177401 52184586 PCT