Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0077 ATGGTTTCACTTGGAGCTATATATAGTGTGATCTATGTGTTCCTGTTTGGAGCTGTTACTTTGGTTTTGGGTGGGGATATAGTTCACCATGATGATGTTGCCCCAAGAAGACCTGGTTGTGAGAACAACTTTGTTTTGGTAAAAGTCCCCACTTGGATTGATGGTGTGGAAAACAGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCAAAAGAAAAACGGGCCAATCTTTCTAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACAAAGCCTAAGAATATGCTCACCAACGAGATCATTTTGGTGCACCGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGATGAAGCTGGTGCTTCAGCCATCCTCATTATAAACTACCGTACAGAACTTTTCAAGATGGTTTGTGAAGAAAATGAAACTGATGTTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGATTGACCTTGGAAAGGCATATAGAAAATAAATCCAATGTGTCAATCCAGTTATACTCTCCACTGCGTCCATTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTAATTGCTTCTTATTGGTCTGCCTGGAGTGCTAGAGAAGCAGCAATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGAGGACTACGTTAATACAGAAAATGTTGGCTCCAGTGGTTATGTGGAAATCAGTACTGTAGCAGCAATTTTATTTGTTGTGATTGCTTCTTGCTTCTTGGTTATGCTGTATAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTCTTTTGCATTGGTGGGATAGAGGGTCTACAAACTTGTTTGGTGGCTCTGTTATCATGTTTCAGATGGTTTCAACAACCTGCTCAAACATTTGTGAAGATACCCTTCTTTGGAGCTGTCTCATATCTGACAGTTGCTGTTACTCCATTCTGCATAGTGTTTGCTGTGGTTTGGGCAGTTTATCGCCATGCATCGTTTGCTTGGATTGGTCAGGATATCCTTGGTATCACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATATGACATTTTTTGGGTGTTTGTCTCTAAACGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTTCTCAAGATACCACGTCTATTTGATCCTTGGGGTGGTTACAGTATCATCGGATTTGGGGACATAATCTTACCAGGACTTATAGTGGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGGGCTGGATACTTCTTGTGGGCAATGACTGCCTACGGTTTAGGTCTCCTCATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTTTATATAGTCCCATTTACACTTGGCACCTTTTTGTCATTGGGAAAAAAGAGAGGGGAGCTCAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCATTGCCCTCATATCCAAGAGGATAACCAATCAATTGACAGCCACCATTAA 1629 0.418 MVSLGAIYSVIYVFLFGAVTLVLGGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANLSRVVMADPPDCCTKPKNMLTNEIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQDAGLTLERHIENKSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILIASYWSAWSAREAAIEQEKLLKDASEDYVNTENVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGIEGLQTCLVALLSCFRWFQQPAQTFVKIPFFGAVSYLTVAVTPFCIVFAVVWAVYRHASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERHCPHIQEDNQSIDSHH* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0077 542 Pfam PA domain 90 167 IPR003137 -
Gso3g0077 542 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 542 - -
Gso3g0077 542 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 542 IPR007369 GO:0004190|GO:0016021
Gso3g0077 542 SUPERFAMILY PA domain 100 137 IPR046450 -
Gso3g0077 542 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Gso3g0077 542 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016021
Gso3g0077 542 Gene3D - 40 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0077 Gso-Chr3 828598 836543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0077 K09597 - gmx:100779540 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0609 7 6473457 6482218 Gso3g0077 3 828598 836543 GST
Gso18g1967 18 52177401 52184586 Gso3g0077 3 828598 836543 PCT
Gso9g2135 9 45632310 45639708 Gso3g0077 3 828598 836543 PCT
Gso3g0077 3 828598 836543 Gso18g1967 18 52177401 52184586 PCT
Gso3g0077 3 828598 836543 Gso9g2135 9 45632310 45639708 PCT