Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1786 ATGGCCTTCGACAACAAATCCAAGAAGTCTAGTTCCCCTTCTAATTCTACTTTCTTCATCACCCTTGTTTTCCTTGTCCTCTGTACCATACCAGTATTTTTACTCCTCCAAACAACCACCACCCTCTCCAAAACCTGGTCAGGCGATCTTCGTTTAGCTGAATTCGCATGGAACAAACTCCCATTTCTTGAACACAACCCTTCACCCGTACCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACCACTCCTGGTGGCATGGAGCGCCATGCATTCACCCTTCACACCGCTCTAGCTCAACGTGGCCACAAGGTTCATATCTTCACCTCTCCACCACAAGAAGAAAGTGCTTCAGACACAACAATCAATCACCAAGCAGATGCTAATGCTAATGCACCCTCTTCACCTTACATCCATTGTCACGAAGGGGAGCCGGGTAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCATTCGATGTAGTTCACTCAGAGAGTGTAGCACTTCCTCACTGGCTTGCTCGCGAACTTCCCAACCTTGCAGTTTCTTGGCATGGCATAGCTCTTGAAAGCTTGCAATCTAGTATCTTCCAAGACTTGGCTCGTACGCAACATGACGAGGCTAGTTCCCCAGACTTTGACAAAGGCTTACAAGGGGTTCTCCCTAAGATTCTAAATGAGATAAGATTCTTCAGGAAATATGCACACCATGTTGCTATCAGTGATAGTTGTGGTGAGATGCTAAGAGACGTGTACCAAATTCCCAAGAGAAGAGTGCATGTGATTCTCAACGGGGTAGATGAGGATGGCTTCAGAGAAGATCTAGAATTGGGAAAGGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGCTTGGTGTAGCTGGAAGATTGGTGAAGGACAAAGGTCACCCTCTCCTTCATGAAGCATACTCTATGCTAATAACCAAGTACCCCAATGTGTATTTGATTGTAGCTGGGTCAGGACCATGGGAGAATCGGTATAGGGACTTAGGGAGGCAAGTTCTTGTTCTTGGATCAATGAGTCCTTCCATGCTACGAGCATTCTACAATGCCATTGACATCTTTGTCAATCCTACACTTAGGCCACAAGGGCTTGATCTTACTCTGATGGAAGCCATGATGAGTGGGAAGCCTCTTTTGGCATCGAGGTTTCCGAGCATCAAAGGTAGTGTTGTGGTGGACGATGAATTTGGCTTCATGTTCTCTCCCAACGTGGAATCACTCTTGGAGGCTCTCCAAGCTGTGGTGAAGGAAGGCAAGGAAAGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACTGCAACAAAGATGGCCTTGGCGTATGAGAGACTATTCCTATGCATAAAAGAAGATAAATTTTGTAACTATCCTTGA 1455 0.455 MAFDNKSKKSSSPSNSTFFITLVFLVLCTIPVFLLLQTTTTLSKTWSGDLRLAEFAWNKLPFLEHNPSPVPLKIAVFSRKWPIGTTPGGMERHAFTLHTALAQRGHKVHIFTSPPQEESASDTTINHQADANANAPSSPYIHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARELPNLAVSWHGIALESLQSSIFQDLARTQHDEASSPDFDKGLQGVLPKILNEIRFFRKYAHHVAISDSCGEMLRDVYQIPKRRVHVILNGVDEDGFREDLELGKEFRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSMLITKYPNVYLIVAGSGPWENRYRDLGRQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSVVVDDEFGFMFSPNVESLLEALQAVVKEGKERLARRGKACREYAISMFTATKMALAYERLFLCIKEDKFCNYP* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1786 484 Pfam Glycosyltransferase Family 4 88 279 IPR028098 -
Gso9g1786 484 PANTHER GLYCOSYLTRANSFERASE 1 484 - -
Gso9g1786 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 73 472 - -
Gso9g1786 484 Gene3D Glycogen Phosphorylase B; 71 292 - -
Gso9g1786 484 PANTHER GLYCOSYLTRANSFERASE 1 484 - -
Gso9g1786 484 Gene3D Glycogen Phosphorylase B; 293 455 - -
Gso9g1786 484 CDD GT4_PimA-like 73 472 - -
Gso9g1786 484 Pfam Glycosyl transferases group 1 303 445 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1786 Gso-Chr9 42325661 42327540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1786 1 484 Glycosyltransferase AT4G19460 62.648 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1786 - - gmx:100817087 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1289 1 49328845 49330448 Gso9g1786 9 42325661 42327540 GST
Gso9g1786 9 42325661 42327540 Gso16g0604 16 7587143 7589225 PCT
Gso16g0604 16 7587143 7589225 Gso9g1786 9 42325661 42327540 PCT