Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1289 ATGGCCTTCAACAACAAATTCAAGAAGTCCAGTTCCCCTTCTAATTTAACTTTCTTCATCACCCTTTTCTTCCTTGTCCTCTGCACCATACCAGTATTCTTACTCCTCCAAACATCCACCACAAGCACCACCCTCTCCAAAACCTGGTCAGGTGATCTTCGTTTAGCCGAATTTGCATGGAACAAACTCCCATTTCTTGAACACAACCCTTCACCGGTACCTCTCAAAATCGCTGTCTTCTCTAGAAAATGGCCTATTGGAACCATTCCTGGTGGCATGGAGCGCCATGCATACACCCTTCACACTGCTCTAGCTCAACGTGGCCACAAGGTTCATATCTTCACCTCTCCCCCACAAGAAGAAACCACTTCAACCTTCTCTTCAGACACAACCAAAGAAGCAGATGCTAACGCACCCTCTTCACCTTATATCCATTGTCATGAAGGGGAGCCGGGTAAGTGGCGCTACAACAAAGCATGGGAACAGTTTCTGGAACAAAACCAGAAAGAACCATTCGATGTTGTTCACTCAGAAAGTGTAGCACTCCCTCACTGGCTCGCTCGCGAACTTCCGAACCTTGCAGTTTCATGGCATGGCATAGCTCTTGAAAGCTTGCAATCTAGTATCTTCCAAGACTTGGCTCGTACGCAAGACGAGCCTAGATCCCCGAATTTCGACAAAGGCTTACAAGGTGTTCTCCCTAAGATTCTAAATGAGATAAGGTTCTTCAGGAAATATGCACACCATGTTGCCATTAGTGATAGTTGTGGTGAGATGTTAAGAGATGTGTACCAAATTCCCAACAAAAGAGTGCATGTAATTCTCAATGGGGTAGATAAGGATGAATTCAGAGAAGATGTGGAATTGGGAAAGGAATTTAGAATCAAAATTGGCATTCCAAGCAATGCTAGTTTAGTGCTTGGTGTAGCTGGAAGATTGGTGAAGGACAAAGGTCACCCTCTCCTTCACGAAGCATACTCTATGCTAATAACCAAGTACCCCAATGTGTATTTGATTGTAGCTGGCTCAGGACCGTGGGAGAATCGGTATAGGGACTTAGGGAGCCATGTTCTTGTTCTTGGATCAATGAGTCCTTCCATGCTAAGAGCATTCTATAATGCTATTGACATTTTTGTCAATCCTACACTTAGGCCACAAGGGCTTGATCTTACTATGATGGAAGCCATGATGAGTGGGAAGCCACTTTTGGCGTCGAGGTTTCCGAGCATCAAAGGTAGTGTTGTGGTTGATGATGCATTTGGCTTCATGTTCTCTCCCAATGTGGAGTCCCTCTTGGAGGCACTCGAAGCAGTGGTGAAGGAAGGAAAGGAAAGGCTTGCAAGGAGGGGAAAGGCATGCCGTGAATATGCAATTTCTATGTTTACTGCAACAAAGATGGCGTTGGCATATGAGAGACTATTCCTATGCATAAAAGAAGATAGATTTTGTAACTATCCTTGA 1461 0.4476 MAFNNKFKKSSSPSNLTFFITLFFLVLCTIPVFLLLQTSTTSTTLSKTWSGDLRLAEFAWNKLPFLEHNPSPVPLKIAVFSRKWPIGTIPGGMERHAYTLHTALAQRGHKVHIFTSPPQEETTSTFSSDTTKEADANAPSSPYIHCHEGEPGKWRYNKAWEQFLEQNQKEPFDVVHSESVALPHWLARELPNLAVSWHGIALESLQSSIFQDLARTQDEPRSPNFDKGLQGVLPKILNEIRFFRKYAHHVAISDSCGEMLRDVYQIPNKRVHVILNGVDKDEFREDVELGKEFRIKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSMLITKYPNVYLIVAGSGPWENRYRDLGSHVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTMMEAMMSGKPLLASRFPSIKGSVVVDDAFGFMFSPNVESLLEALEAVVKEGKERLARRGKACREYAISMFTATKMALAYERLFLCIKEDRFCNYP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1289 486 Gene3D Glycogen Phosphorylase B; 294 457 - -
Gso1g1289 486 MobiDBLite consensus disorder prediction 117 137 - -
Gso1g1289 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 474 - -
Gso1g1289 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Gso1g1289 486 CDD GT4_PimA-like 76 474 - -
Gso1g1289 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Gso1g1289 486 MobiDBLite consensus disorder prediction 117 144 - -
Gso1g1289 486 Pfam Glycosyl transferases group 1 306 447 IPR001296 GO:0016757
Gso1g1289 486 Gene3D Glycogen Phosphorylase B; 74 293 - -
Gso1g1289 486 Pfam Glycosyltransferase Family 4 91 281 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1289 Gso-Chr1 49328845 49330448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1289 1 486 Glycosyltransferase AT4G19460 63.366 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1289 - - gmx:100817087 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1289 1 49328845 49330448 Gso1g1289 1 49328845 49330448 ECH
Gso1g1289 1 49328845 49330448 Gso9g1786 9 42325661 42327540 GST
Gso1g1289 1 49328845 49330448 Gso16g0604 16 7587143 7589225 PCT
Gso16g0604 16 7587143 7589225 Gso1g1289 1 49328845 49330448 PCT