Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0604 ATGCACATATCCTCAGAACTCCCTGAGGAAATGGCCCTCAATACCACCAAGTCTAAAAACTCAACTTCACCTTCAAATTTCTACTTGTGCACCACTCTTTTCTTCATTGTCCTCTTCACCATACCCGTTCTTTTCCTCCTCCATGCCCCAACCACCACCATCTCCATATGCACCAACCCAGCCAAAACATGGTCTGGTGATCTTCAGTTAGTTGAATTTGCGTGGAACCGCCTCTCGTTTTTTGAACACAAGCCACCACCCTTTGCTCTCAAAGTTGCTGTCTTCTCCAGGAAATGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGCCATGCTCACACCCTTCACACGGCTTTGGCACGCCGTGGCCATCAAATTCATGTCTTCACATCTCCACCTGATCAAGATGAGAGCATTTCAATCTCATCATTCTCTGAGGTGAACAAAAACAACCATCAATCTTCCCCTTACATCCATTTCCATGAAGGTGAGCCTGGCAGGTGGCACTATAACAAGGCGTGGGAACAGTTTGTAGAAGAAAACAAGCCAGAACCATTCGATGTTGTGCACTCAGAAAGTGTGGCACTCCCTCACTGGCTAGCGCGCAACATGTCAAATCTTGCAGTGTCTTGGCATGGCATAGCCCTTGAGAGCTTGCAATCAAGTATTTTCCAGGACTTGACTCGCCGGCCTGACGAGCCTATGTCCCCTCTCTTCAACAAAAGCATACAGGGTGTTGTGCCAAAGGTGCTGAATGAGATAAGGTTCTTCAGGAATTATGCCCATCATGTTGCTATTAGTGATAGTTGTGGTGAGATGCTGAGGGATGTGTACCAAATTCCTAACACAAGAGTCCATGTAATACTAAATGGTGTTGATGAGGATGACTTTGGAGAAGATGTTGAATTGGGAAGGGAATTCAGAACCAAAATTGGCATTCCAGGGAATGCAAGTTTGGTAATTGGTGTAGCTGGAAGATTAGTGAAGGACAAAGGCCATCCTCTGCTTCATGAAGCATACTCAAGGCTTATAGCCAAGCACCCTAATGTGTACTTGATTGTTGCTGGTTCTGGACCATGGGAGAACAGGTACAGGGATTTAGGGAGCCAGGTTCTTGTTCTGGGATCAATGAGCCCTTCCATGTTAAGAGCTTTCTATAATGCTATTGACATTTTTGTCAATCCCACTCTCAGACCACAAGGGCTTGACCTTACTTTGATGGAGGCAATGATGAGTGGGAAGCCTCTTTTGGCATCAAGATTTCCAAGCATTAAAGGAACTATTGTGGTTGATGATGAATATGGTTACATGTTTTCGCCTAATGTGGAGTCGTTGTTGGAGGCGCTGGAAGCAGTGGTAAAGGAAGGACCGCAGAGGCTAGCAATGCAGGGCAAGGCATCCCGGGAATATGCTGCCAAAATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTCCTATGTATAAAAGATCGTACATTCTGCACCTATCCTTGA 1503 0.4591 MHISSELPEEMALNTTKSKNSTSPSNFYLCTTLFFIVLFTIPVLFLLHAPTTTISICTNPAKTWSGDLQLVEFAWNRLSFFEHKPPPFALKVAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQIHVFTSPPDQDESISISSFSEVNKNNHQSSPYIHFHEGEPGRWHYNKAWEQFVEENKPEPFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLTRRPDEPMSPLFNKSIQGVVPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPNTRVHVILNGVDEDDFGEDVELGREFRTKIGIPGNASLVIGVAGRLVKDKGHPLLHEAYSRLIAKHPNVYLIVAGSGPWENRYRDLGSQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEYGYMFSPNVESLLEALEAVVKEGPQRLAMQGKASREYAAKMFTARKMALAYERLFLCIKDRTFCTYP* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0604 500 Gene3D Glycogen Phosphorylase B; 310 473 - -
Gso16g0604 500 CDD GT4_PimA-like 91 488 - -
Gso16g0604 500 Pfam Glycosyltransferase Family 4 106 295 IPR028098 -
Gso16g0604 500 PANTHER GLYCOSYLTRANSFERASE 11 500 - -
Gso16g0604 500 Gene3D Glycogen Phosphorylase B; 89 309 - -
Gso16g0604 500 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 488 - -
Gso16g0604 500 Pfam Glycosyl transferases group 1 319 463 IPR001296 GO:0016757
Gso16g0604 500 PANTHER GLYCOSYLTRANSFERASE 11 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0604 Gso-Chr16 7587143 7589225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0604 9 500 Glycosyltransferase AT4G19460 62.846 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0604 - - gmx:100810672 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1289 1 49328845 49330448 Gso16g0604 16 7587143 7589225 PCT
Gso9g1786 9 42325661 42327540 Gso16g0604 16 7587143 7589225 PCT
Gso16g0604 16 7587143 7589225 Gso1g1289 1 49328845 49330448 PCT
Gso16g0604 16 7587143 7589225 Gso9g1786 9 42325661 42327540 PCT