Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1229 ATGGCCATAGAGTGCATAACAAATATACAATCAATGTCTCAACCACAAAAGCACCACCAAGAGCACAAAGAAGATGAAGCACCATTGGTTTTTGATGCCTCACTTCTCAGGCACCAACTCAACCTACCAAAACAGTTCATTTGGCCTGATGAGGAAAAGCCATGCATGAATGTGCCTGAGCTTGGTGTCCCTCTCATTGACTTGGGGGGGTTCCTCTCTGGTGACCCTGTTGCAACAATGGAGGCTGCAAGGATAGTTGGTGAGGCATGCCAAAAGCATGGTTTCTTTCTTGTGGTGAACCATGGGATTGATGCCAACTTAATCTCTAATGCTCATAGCTACATGGATGACTTCTTTGAGGTTCCTCTGTCTCAGAAACAGAGGGCTCAGAGGAAAACAGGGGAACACTGTGGTTATGCTAGTAGCTTCACTGGCAGGTTCTCTTCAAAGCTTCCATGGAAAGAGACACTTTCTTTTCAGTACTCGGCTGAGGAAAATTCATCCACTATTGTCAAAGACTACTTGTGCAACACATTGGAGAAAGAGTTTGAGCAATTTGGGAGGGTTTACCAGGACTATTGTGATGCCATGAGCAATCTTTCTTTGGGGATAATGGAACTTTTGGGAATGAGTCTTGGAGTTGGTAAAGCATGTTTTAGAGAGTTCTTTGAAGAGAATAACTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAGCCTGACCTCACTTTGGGCACTGGACCTCACTGTGACCCAACATCTTTGACCATTCTTCACCAAGACCAAGTGGGAGGCCTCCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAGCCCAAATTTCAATGCTTTTGTTGTCAACATAGGTGACACCTTCATGGCTCTTTCAAATGGAAGGTACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGCAAGACCACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTGGTTAGTCCACCAAGTGAATTGGTGGATGATTTGACACCAAGGATATACCCTGATTTTACATGGCCTATGCTGCTTGAGTTTACTCAGAAACATTATAGAGCTGACATGAAAACCCTTGAGGCATTCACCAACTGGCTTCTTCAACGGAAAATGAGCTGA 1149 0.4378 MAIECITNIQSMSQPQKHHQEHKEDEAPLVFDASLLRHQLNLPKQFIWPDEEKPCMNVPELGVPLIDLGGFLSGDPVATMEAARIVGEACQKHGFFLVVNHGIDANLISNAHSYMDDFFEVPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSAEENSSTIVKDYLCNTLEKEFEQFGRVYQDYCDAMSNLSLGIMELLGMSLGVGKACFREFFEENNSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSISPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSKTTRKSLAFFLCPKGDKVVSPPSELVDDLTPRIYPDFTWPMLLEFTQKHYRADMKTLEAFTNWLLQRKMS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1229 382 SUPERFAMILY Clavaminate synthase-like 38 365 - -
Gso9g1229 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 325 IPR005123 -
Gso9g1229 382 PRINTS Isopenicillin N synthase signature 86 103 - -
Gso9g1229 382 PRINTS Isopenicillin N synthase signature 250 271 - -
Gso9g1229 382 PRINTS Isopenicillin N synthase signature 285 311 - -
Gso9g1229 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 378 - -
Gso9g1229 382 Pfam 2OG-Fe(II) oxygenase superfamily 227 325 IPR044861 -
Gso9g1229 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 167 IPR026992 -
Gso9g1229 382 Gene3D - 35 363 IPR027443 -
Gso9g1229 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1229 Gso-Chr9 35340704 35342793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1229 42 377 Glycosyltransferase AT5G59530 27.954 1.12e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1229 K05282 - gmx:100305378 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1607 16 36688918 36690721 Gso9g1229 9 35340704 35342793 GST
Gso9g1229 9 35340704 35342793 Gso20g1230 20 42288106 42290116 PCT
Gso9g1229 9 35340704 35342793 Gso10g2151 10 48546472 48548674 PCT
Gso20g1230 20 42288106 42290116 Gso9g1229 9 35340704 35342793 PCT
Gso10g2151 10 48546472 48548674 Gso9g1229 9 35340704 35342793 PCT