Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1607 ATGGCCATAGAGTGCATAACAAATATACAATCTATGTCTCAACCACAAAAGCATCACCAAGACCACAAAGAAGATGAAGCACCATTGGTTTTTGATGCCTCACTTCTCAGGCACGAACTCAACCTACCAAAGCAGTTCATTTGGCCAGATGAGGAGAAGCCATGCATGAATGTGCCTGAACTTGCTGTCCCTCTCATTGACTTGGGAGGGTTTATCTCTGGTGACCCTGTTGCGACAATGGAGGCTGCAAGGATGGTTGGTGAGGCATGCCAAAAGCATGGTTTCTTTCTTGTGGTGAATCATGGGATTGATGCCAAGTTAATCTCTCATGCTCATAGCTACATGGATGACTTCTTTGAGATTCCCCTGTCTCAGAAACAGAGGGCGCAGAGAAAAACAGGGGAACACTGTGGCTATGCTAGTAGCTTCACTGGCAGGTTCTCTTCAAAGCTTCCATGGAAAGAGACACTTTCTTTTCAGTACTCAGCTGAGGAAAACTCATCCACTATTGTCAAAGACTACTTGTGCAACACATTGGGGAAGGAGTTTGAGCAATTTGGGAGGGTTTACCAGGACTATTGTGATGCCATGAGTAATCTTTCTTTGGGGATAATGGAACTTTTGGGAATGAGTCTTGGAGTTGGTAAAGAATGTTTTAGTGAGTTCTTTGAAGAGAATAACTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTCACTTTGGGCACTGGACCTCACTGTGACCCAACATCTTTGACCATTCTTCACCAAGACCAAGTGGGAGGCCTCCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAGCCCAAATTTCAATGCTTTTGTTGTCAACATAGGTGACACCTTCATGGCTCTTTCAAATGGGAGGTACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGTAGGACCACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTAGTTAGTCCACCAAGTGAATTGGTGGATGATTTGACCCCAAGGGTCTACCCAGATTTTACATGGCCTATGCTGCTTGAGTTTACTCAGAAACATTATAGAGCTGACATCAAAACCCTTGAGGCATTCACCAACTGGCTTCTTCAACGGAAAACGAACTGA 1149 0.4395 MAIECITNIQSMSQPQKHHQDHKEDEAPLVFDASLLRHELNLPKQFIWPDEEKPCMNVPELAVPLIDLGGFISGDPVATMEAARMVGEACQKHGFFLVVNHGIDAKLISHAHSYMDDFFEIPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSAEENSSTIVKDYLCNTLGKEFEQFGRVYQDYCDAMSNLSLGIMELLGMSLGVGKECFSEFFEENNSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSISPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSRTTRKSLAFFLCPKGDKVVSPPSELVDDLTPRVYPDFTWPMLLEFTQKHYRADIKTLEAFTNWLLQRKTN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1607 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 325 IPR005123 -
Gso16g1607 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 167 IPR026992 -
Gso16g1607 382 Pfam 2OG-Fe(II) oxygenase superfamily 227 325 IPR044861 -
Gso16g1607 382 PRINTS Isopenicillin N synthase signature 86 103 - -
Gso16g1607 382 PRINTS Isopenicillin N synthase signature 250 271 - -
Gso16g1607 382 PRINTS Isopenicillin N synthase signature 285 311 - -
Gso16g1607 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 378 - -
Gso16g1607 382 SUPERFAMILY Clavaminate synthase-like 38 365 - -
Gso16g1607 382 Gene3D - 35 363 IPR027443 -
Gso16g1607 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1607 Gso-Chr16 36688918 36690721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1607 42 375 Glycosyltransferase AT5G59530 28.406 3.37e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1607 K05282 - gmx:100305378 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1607 16 36688918 36690721 Gso9g1229 9 35340704 35342793 GST
Gso16g1607 16 36688918 36690721 Gso20g1230 20 42288106 42290116 PCT
Gso16g1607 16 36688918 36690721 Gso10g2151 10 48546472 48548674 PCT
Gso20g1230 20 42288106 42290116 Gso16g1607 16 36688918 36690721 PCT
Gso10g2151 10 48546472 48548674 Gso16g1607 16 36688918 36690721 PCT