Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1200 ATGGGGGCTGGTGTTTCTACAACTGCAACAGAAAATGATGATGGGGGCACTTTTTCTTTGTCATCAGAGACTAGCCTTGATGATATCCCTGAGAACTGCATCTCTTCAATGATGATGAATTTTGATCCACAAGAGATTTGCTCATTGGCAAGAGTCAACAAAACCTTTCACAGAGCTTCCTCTGCTAACTTTGTGTGGGAATCAAAACTGCCCCAAAACTATAAATTTCTTCTCAATAAAGTACTTGGTGAACAAAATCTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTATGCCAACCCAATTTCTTTGATGGTGGTACCAAAGAAGTTTGGCTGGACAGAAGCAGTGGACAAGTTTGTATGTTCATTTCATCAAAATCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATTATATTCCAACTGAGGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTAATAGGGGAGCTAGAGTTTGAGTTTCCAAAAGGGAACTATAGTGTATTTTTTAAGCTTCAATTGGGAAAGCCCTCAAAGAGATTGGGCCGGCGAGTGTGCAACCTTGATCAAGTGCACGGCTGGGACATCAAGCCCGTTAGATTTCAACTATCTACATCGGACGGCCAGCGTTCACTCTCCCAGTGCTACTTGCGTGGGTCCAGAGAATGGGCCTACTACCATGTTGGAGACTTTGCAATCGATAAGCCCAATGGACCAACCAACATTAACTTTTCCTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGTCTTTGCATAGATGGGGTAGTGATTTGCCCAAAGGAGTTCACACAAGGATTGAAACAATTTTAG 870 0.4218 MGAGVSTTATENDDGGTFSLSSETSLDDIPENCISSMMMNFDPQEICSLARVNKTFHRASSANFVWESKLPQNYKFLLNKVLGEQNLGSMTKKEIYAKLCQPNFFDGGTKEVWLDRSSGQVCMFISSKSFKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQLGKPSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGSREWAYYHVGDFAIDKPNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKEFTQGLKQF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1200 289 MobiDBLite consensus disorder prediction 1 24 - -
Gso9g1200 289 Pfam Phloem protein 2 121 279 IPR025886 -
Gso9g1200 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Gso9g1200 289 PANTHER F-BOX PROTEIN 1 289 - -
Gso9g1200 289 SUPERFAMILY F-box domain 19 85 IPR036047 GO:0005515
Gso9g1200 289 PANTHER F-BOX PROTEIN PP2-A15 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1200 Gso-Chr9 34607892 34611920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1200 - - gmx:100787859 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1582 16 36369517 36373467 Gso9g1200 9 34607892 34611920 GST
Gso9g1200 9 34607892 34611920 Gso20g1247 20 42518239 42522100 PCT
Gso9g1200 9 34607892 34611920 Gso10g2129 10 48298372 48302210 PCT
Gso20g1247 20 42518239 42522100 Gso9g1200 9 34607892 34611920 PCT
Gso10g2129 10 48298372 48302210 Gso9g1200 9 34607892 34611920 PCT