Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1247 ATGGGGGCTGGTGTTTCTTCAACTAATAAAGCTGAAAAGGACGGAGGAGGGTCTATTTCTTCGTCATCAAGAGATTCAAGACCCGGTCTTGGTGACTTCCCAGAGAGTTGCATCTCCTCCTTGTTCATGAATCTTGATCCACCCGATATATGCAAATTGGCAAGAGTGAATAGGGCCTTTCATCGAGCTTCCTCAGCTGATTTTGTATGGGAATCAAAGTTGCCACCGAGTTACAAGTTTCTTGCTAATAAAGTTCTTGGTGAAGAAAATATTGCTACTATGACTAAGAAAGAGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAAGAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCCAAATCCTTGAAGATTACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACTGAAGAATCCAGGTTCCAGAGTGTTGCGTATCTTCAACAAATGTGGTGGGTTGAAGTGGTCGGGGAGCTAGAGTTCGAATTCCCTGTGGGTAGTTACAGCTTAGTTTTCAGACTCCAATTGGGCAAGGCCTCCAAGAGATTGGGCCGGCGCGTGTGCAACGTTGATCAAGTGCATGGCTGGGACATCAAGCCCGTCCGATTCCAACTCTCCACATCCGACGGCCAGAGTTCACTCTCAGAGTGTTACTTGCGTGGGCCTGGGGAGTGGGTCTACTACAATGTTGGAGATTTCGTGGTGGAAAAGCCCAAGGAGCCAATAAATATCAAGTTTTCATTGGCCCAAATAGATTGCACTCACACCAAAGGTGGCCTCTGCGTAGATAGTGCCATCATTTGCCCAACGGAGTTTAAAGAAAGACTCAAACAAAGTTAG 882 0.4478 MGAGVSSTNKAEKDGGGSISSSSRDSRPGLGDFPESCISSLFMNLDPPDICKLARVNRAFHRASSADFVWESKLPPSYKFLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRFQSVAYLQQMWWVEVVGELEFEFPVGSYSLVFRLQLGKASKRLGRRVCNVDQVHGWDIKPVRFQLSTSDGQSSLSECYLRGPGEWVYYNVGDFVVEKPKEPINIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1247 293 Pfam Phloem protein 2 125 283 IPR025886 -
Gso20g1247 293 PANTHER F-BOX PROTEIN 1 292 - -
Gso20g1247 293 MobiDBLite consensus disorder prediction 1 30 - -
Gso20g1247 293 ProSiteProfiles F-box domain profile. 27 73 IPR001810 GO:0005515
Gso20g1247 293 MobiDBLite consensus disorder prediction 11 27 - -
Gso20g1247 293 PANTHER F-BOX PROTEIN PP2-A15 1 292 - -
Gso20g1247 293 SUPERFAMILY F-box domain 23 86 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1247 Gso-Chr20 42518239 42522100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1247 - - gmx:100782620 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1247 20 42518239 42522100 Gso10g2129 10 48298372 48302210 GST
Gso16g1582 16 36369517 36373467 Gso20g1247 20 42518239 42522100 PCT
Gso9g1200 9 34607892 34611920 Gso20g1247 20 42518239 42522100 PCT
Gso20g1247 20 42518239 42522100 Gso16g1582 16 36369517 36373467 PCT
Gso20g1247 20 42518239 42522100 Gso9g1200 9 34607892 34611920 PCT