Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1582 ATGGGGGCCGGTGTTTCTACAACTGCAATAGAAAATGATGATGGGGGCACTTTTTCTTTGTCAACAAAGACTACCCTTGATGATATCCCTGAGAATTGCATCTCTTCAATGATGATGAGTTTTGATCCACAAGAGATTTGCACATTGGCAAGAGTGAACAAGGCCTTTCACAGAGCTTCCTCTGCTGACTTTGTGTGGGAATCAAAGTTGCCCCCAAGCTATAAATTCCTTCTAAATAAAGTACTTGGTGAACAAAGTCTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTGTGTAGACCAAATTTCTTTGATGGTGCCAACAAAGAAGTTTGGCTGGACAGAAGCAGAGGACAAGTTTGTATGTTCATTTCATCAAAATCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATAATATTCCAACTGAGGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTAATAGGGGAGCTAGAGTTTGAGTTTCCAAAAGGGAACTATAGTGTATTTTTCAAGCTTCAATTGGGCAAGCCCTCAAAGAGATTGGGCCGGCGAGTGTGCAACCTTGATCAAGTGCATGGATGGGACATCAAGCCCGTTAGATTTCAACTATCTACATCGGACGGCCAGCGTTCACTCTCCCAGTGCTATTTGCGTGGGCCCGGAGAGTGGGCCCACTACCATGTTGGTGACTTTGCAATCGATAAGCCCAATGGGCCAACCAACATCAACTTCTCCTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGTCTTTGCATAGATGGGGTAGTGATTTGCCCGAAGGAGTTCACAGAAAGATTGAAACAATTTTAG 870 0.4333 MGAGVSTTAIENDDGGTFSLSTKTTLDDIPENCISSMMMSFDPQEICTLARVNKAFHRASSADFVWESKLPPSYKFLLNKVLGEQSLGSMTKKEIYAKLCRPNFFDGANKEVWLDRSRGQVCMFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQLGKPSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGPGEWAHYHVGDFAIDKPNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKEFTERLKQF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1582 289 Pfam Phloem protein 2 121 279 IPR025886 -
Gso16g1582 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Gso16g1582 289 SUPERFAMILY F-box domain 21 96 IPR036047 GO:0005515
Gso16g1582 289 PANTHER F-BOX PROTEIN PP2-A15 1 289 - -
Gso16g1582 289 PANTHER F-BOX PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1582 Gso-Chr16 36369517 36373467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1582 - - gmx:100816360 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1582 16 36369517 36373467 Gso9g1200 9 34607892 34611920 GST
Gso16g1582 16 36369517 36373467 Gso20g1247 20 42518239 42522100 PCT
Gso16g1582 16 36369517 36373467 Gso10g2129 10 48298372 48302210 PCT
Gso20g1247 20 42518239 42522100 Gso16g1582 16 36369517 36373467 PCT
Gso10g2129 10 48298372 48302210 Gso16g1582 16 36369517 36373467 PCT