Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1100 ATGGAGACACCATTAGTGGTCCAAAATTTTACTTCAGAAGCTGACTATTTTCCAGTGAAAAGCTTGAAGGATGTTAAATTTGTTTTGTGGGCAGAGACAGTGAAGATATGGAGAATAGCATTGCCAGTGGCATTGACCCATCTATTCCAGGTTCTCACAAACTCCTCAACTTCCATATATGCTGGTCATCTTGGAGACATTGAACTCTCTTCTATCTCTGTGAGCCAAGGGGTCATGAGTTCCATCTATTTTCAGTTGTTGTTTGGTATGTCATCTGCACTGGCCACACTTTGTGGCCAAGCTTTTGGAGCAGGACAAATTCAATCTACTTGCATTTATGTTCAAAGGTCATGGATTATACTTACTGCCACTTGTATAATCCTCTTGCCTATTTATATATATGCCACTCCAATCTTAAAGTTGCTTGGCCAAGATGAAGGAATAGCTAATCTTGCTGGCAGATATTCTATTCAAGTAATTCCCCACATGTTTTCATTTGCTATAGTTTTTCCCACCCTTAGATTTCTTCAGGCCCAGAGCAAGGTTAAAGTTATTATGTGCATAGCATTTGTTGTTTTGCTCATACAAAATGGACTGCTTTACATCTTCATAAATATATTTGGTTGGGGTATAACCGGCTTGGCCATGGTGAGTAATATTATAGGGTGGTTGTATGCTGGGGCTTTGGTTGTCTATACCATTAGTTGGTGCAAAGAAGAATGGAGTGGATTTTCTTGGATGGCATTTAGGGATTTGTTGGCCTTTGCTAAGTTAAGTCTTCAATCATCTGTAATGGGTTGCTTAGAGCAATGGTATATGACATGCATTATGCTACTTGCTGGTCTTCTAGACAATCCTGTGATTGCTGTTGGCTCCTATTCTATTTGCTTCAGCGTTCAGGGTTGGCACTTCATGCTGCTCCTTGGAATAAGTACGGCTATAAGTGTTCGCATCTCCAATGCGCTTGGCATGTCGCAGCCAAGAGCAGCCAAATACACTTTCTGTGTGACCATGTTCCAGTCTCTCCTCCTTGGTGTTCTTTTCATGAATGTTATTTTCTTGACTAAAGAAGACTTCGCCATTATCTTTACCAATAGTGAGGATATGATACAAGCTGTTGCTGATTTAGCATACCTTCTTGGTGTAACCATGGTTCTCAATAGTGCTTCACAGGTCATGTCAGGTGTGGCCATTGGAAGTGGATGGCAAGTTATGGTTGCTTTCATAAACCTTGCCTGTTATTACATTGTTGGACTGCCAATTGGATATTTCCTTGGTTTCAAGCAGCATTTAGGGGTTAAGGGTCTGTGGGGAGGCACAATGTGCGGCAGTGTTCTTCAGATTTTAATCCTCTTACTGATAATCCGTAAGACCAACTGGACCAAGGAGGTGGAGCAAACTGCTCATCGCATGCGAATATGGAACGTTAACAATTTCCGCTCAGACTTGGCAGAAAATGTTACATGA 1467 0.4138 METPLVVQNFTSEADYFPVKSLKDVKFVLWAETVKIWRIALPVALTHLFQVLTNSSTSIYAGHLGDIELSSISVSQGVMSSIYFQLLFGMSSALATLCGQAFGAGQIQSTCIYVQRSWIILTATCIILLPIYIYATPILKLLGQDEGIANLAGRYSIQVIPHMFSFAIVFPTLRFLQAQSKVKVIMCIAFVVLLIQNGLLYIFINIFGWGITGLAMVSNIIGWLYAGALVVYTISWCKEEWSGFSWMAFRDLLAFAKLSLQSSVMGCLEQWYMTCIMLLAGLLDNPVIAVGSYSICFSVQGWHFMLLLGISTAISVRISNALGMSQPRAAKYTFCVTMFQSLLLGVLFMNVIFLTKEDFAIIFTNSEDMIQAVADLAYLLGVTMVLNSASQVMSGVAIGSGWQVMVAFINLACYYIVGLPIGYFLGFKQHLGVKGLWGGTMCGSVLQILILLLIIRKTNWTKEVEQTAHRMRIWNVNNFRSDLAENVT* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1100 488 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Gso9g1100 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 476 - -
Gso9g1100 488 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g1100 488 PANTHER PROTEIN DETOXIFICATION 1 476 - -
Gso9g1100 488 Pfam MatE 263 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso9g1100 488 Pfam MatE 42 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1100 Gso-Chr9 31685549 31692549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1100 K03327 - gmx:100817098 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1482 16 35007902 35011736 Gso9g1100 9 31685549 31692549 GST
Gso9g1100 9 31685549 31692549 Gso20g1301 20 43029796 43033859 PCT
Gso9g1100 9 31685549 31692549 Gso10g2075 10 47726008 47730449 PCT
Gso20g1301 20 43029796 43033859 Gso9g1100 9 31685549 31692549 PCT
Gso10g2075 10 47726008 47730449 Gso9g1100 9 31685549 31692549 PCT