Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1482 ATGGAGACACCTTTAGTGATCCAGAAGTTCACTTCAGAATCTGACTACTTGCCGGTGAAAAGCTTGAAGGATTTGAAGTTTGTTTTGTGGACAGAGACAGTGAAGATATGGAGAATAGCATTCCCTATGGCACTGTCTGCACTGCTTCAGTTTCTCACAATCTCCTCAACTTCCATCTATGCTGGCCATCTTGGAGACATTGAACTTTCTTCTATCTCTGTTTACCAAGGTGTCATCAGTGCCATCTATTTTGACTTGTTGTTTGGTATGTCATCTGCATTGGTAACACTTTGTGGCCAAGCTTTTGGAGCAGGACAAATTCAATCAACTTGTATTTATGTTCAAAGGTCATGGATTATACTTACTGCCACTTGTATAATCCTCTTGCCTATTTATGTATGTGCCACTCCAATCTTAAAGTTTATTGGCCAAGACCACGAAATAGCTGATCTTGCTGGAAGATATTCCATACAAGTAATTCCCTACATGTTTTCCTGTGCTATAACTTTTCCCTTCCAGACATTTCTTCAGGCCCAGATCAAGGTTAAAGTTATTACGTGCATAGCACTTGCAGTTTTGGTCATACAAAATGTGCTGCTTTACATCTTCATAAATGTATTTGGTTGGGGTACAACTGGCTTAGCCATGGTGACTAATATCACAGGGTGGGTTTATGCTATGGCTTTGGTTGTGTATACCATTGGTTGGTGTAAGGAAGAATGGACTGGATTTTCATGGATGGCATTCAGGGATTTGTGGTCATTTGCTAAGTTAAGCCTTGCATCATCTGTTATGAGTTGCTTAGAGCAATGGTATGGAACATGCATTATACTACTTGCTGGTCTACTAGACAATCCTGTGATTGATGTTGGTTCCTATTCTATTTGCTTCAATGTTCAGGGTTGGCACACGATGCTGCTCCTTGGAATAAGTGTTGCCATAAGTATTCGTGTCTCCAATACACTTGGCATGTCGCATCCAAGAGCAGCCATATACTCTTTCTGCGTGACAATGTTTCAGTCTCTCCTCCTTGGCATTGTTTTCATGATTGCCATTTTCTTGAGTAAAGATGAGTTTGCCAAGATCTTTACCGACAGTGAGGATATGATACGAGCTGTTGCTGATTTAGCATACCTTCTTGGTGTATCGATGGTTATCAATAGCGCTTCACAAGTGATGTCAGGTGTGGCCGTTGGGAGTGGATGGCAAGTTATGGTTGGTTACATAAACCTGGCATGTTATTACGTTGTTGGACTCCCTATTGGAATTTTTCTTGGTTTCAATCAACATTTAGGGGTCAAGGGTCTCTGGGGAGGCACCATGTGTGGCAGGATTCTTCAAATGTTAGCCCTCTTAATCATTATTTGGAAGACCAACTGGTCCAAGGAGGTGGAGCAAACAGCTCATCGCATGAGAATATGGAGCATCAACAACCTCCACTCGAATGACATGGGAAATGTTACATGA 1467 0.4165 METPLVIQKFTSESDYLPVKSLKDLKFVLWTETVKIWRIAFPMALSALLQFLTISSTSIYAGHLGDIELSSISVYQGVISAIYFDLLFGMSSALVTLCGQAFGAGQIQSTCIYVQRSWIILTATCIILLPIYVCATPILKFIGQDHEIADLAGRYSIQVIPYMFSCAITFPFQTFLQAQIKVKVITCIALAVLVIQNVLLYIFINVFGWGTTGLAMVTNITGWVYAMALVVYTIGWCKEEWTGFSWMAFRDLWSFAKLSLASSVMSCLEQWYGTCIILLAGLLDNPVIDVGSYSICFNVQGWHTMLLLGISVAISIRVSNTLGMSHPRAAIYSFCVTMFQSLLLGIVFMIAIFLSKDEFAKIFTDSEDMIRAVADLAYLLGVSMVINSASQVMSGVAVGSGWQVMVGYINLACYYVVGLPIGIFLGFNQHLGVKGLWGGTMCGRILQMLALLIIIWKTNWSKEVEQTAHRMRIWSINNLHSNDMGNVT* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1482 488 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Gso16g1482 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 476 - -
Gso16g1482 488 PANTHER PROTEIN DETOXIFICATION 1 476 - -
Gso16g1482 488 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso16g1482 488 Pfam MatE 262 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso16g1482 488 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1482 Gso-Chr16 35007902 35011736 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1482 K03327 - gmx:100789611 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1482 16 35007902 35011736 Gso9g1100 9 31685549 31692549 GST
Gso16g1482 16 35007902 35011736 Gso20g1301 20 43029796 43033859 PCT
Gso16g1482 16 35007902 35011736 Gso10g2075 10 47726008 47730449 PCT
Gso20g1301 20 43029796 43033859 Gso16g1482 16 35007902 35011736 PCT
Gso10g2075 10 47726008 47730449 Gso16g1482 16 35007902 35011736 PCT