Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0624 ATGGCAAATCATCCTTTGACACACTCTCACTCTTTCCGCGAGAGGTTTGATGAAACTCTCACTGGTCACAGGAACGAAATTTTGGCCCTTCTGTCAAGGCTTGAAGCCAAGGGCAAGGGAATCCTGCAACATCACCAAGTGGTTGCAGAGTTTGAAGAAATCCCTGAGGAGAGCAGAAAGAAACTCCAAGATGGTGTCTTTGGAGAAGTTTTGAGATCCACACAGGAAGCCATAGTGCTGCCACCATTTGTAGCTCTTGCTGTTCGACCAAGGCCTGGTGTATGGGAATATCTGCGTGTGAATGTGCACATGCTTGTTGTTGATGAGCTTCGTCCTGCTGAGTATCTGCGTTTCAAGGAGGAGCTTGTTGAGGGAAGTTCAAACGGCAACTTTGTGCTTGAGTTGGACTTTGAACCGTTTAATGCATCCTTCCCTCGCCCAACTCTGAACAAGTCCATTGGAAATGGCGTCGAGTTCCTCAACCGCCACCTTTCGGCCAAGCTCTTCCATGACAAGGAGAGCATGCAGCCACTGCTTGAGTTCCTCAGGCTTCACAGTTATAAGGGAAAGACCATGATGTTGAATGACAAAGTTCAAAGCCTGGATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGAGTATCTGATTTCAGTTGCTCCTGAAACACCCTACTCGGAATTCGAAAACAGATTCCGGGAGATTGGTCTGGAGAGGGGGTGGGGTGACACTGCCGAGCGTGTCCTCGAGATGATCCAGCTTCTCCTGGACCTTCTTGAAGCGCCTGACCCTTGCACCCTCGAGACATTCCTTGGAAGAGTCCCTATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCCTTGATATCACCCCTCGTATTCTCATTATCACTCGTCTTCTCCCTGATGCGGTAGGAACTACCTGTGGCCAACGTCTAGAGAGGGTATATGATACTGAATATTGTGACATTCTCAGAGTTCCTTTCAGAACAGAAAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCATACCTAGAGACTTACACTGAGGATGTCGCCCTGGAACTTGCCAAGGAGTTGCAAGCCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGAGTAACTCAGTGTACCATTGCTCATGCTCTAGAAAAGACCAAGTACCCTGAGTCTGACATTTACTGGAAAAAATTTGAAGAGAAATATCATTTCTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATCATCACCAGCACCTTCCAAGAGATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGAGTCACACTGCCTTCACCCTTCCAGGACTTTACCGTGTTGTTCACGGTATTGATCCATTTGATCCAAAGTTCAACATTGTCTCTCCCGGTGCAGACATGGGCATATACTTCCCATACACTGAAACTGAGCGTAGGTTAACAGAATTCCACTCTGACATCGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAACACATATGCGTATTGAAGGACCGCAACAAACCAATAATCTTCACCATGGCAAGGCTTGACCGTGTGAAGAACATCACGGGGCTTGTCGAGTGGTACGGGAAGAACGCACGCCTCCGCGAGTTGGTGAACCTGGTGGTGGTGGCTGGAGACAGGAGGAAGGAGTCGAAGGACTTGGAAGAGAAGGCCGAGATGAAGAAGATGTATGGCCTCATCGAGACCTACAAGTTGAACGGCCAATTCAGATGGATATCCTCTCAGATGAACCGTGTGAGGAACGGAGAGCTCTACCGTGTCATCTGTGACACAAGGGGTGCCTTTGTGCAGCCTGCAGTTTATGAGGCCTTTGGGTTGACTGTGGTTGAGGCCATGACTTGTGGGTTGCCAACGTTTGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTACCACATTGATCCTTACCATGGTGACCATGCTGCTGAGATCCTTGTTGAGTTCTTTGAGAAGAGCAAGGCTGATCCATCTCACTGGGACAAAATCTCCCAGGGTGGACTCAAGCGTATTCATGAGAAGTACACATGGCAAATTTACTCGGACAGGCTCTTGACACTCACTGGTGTGTATGGCTTCTGGAAGCACGTGACCAATCTTGAACGCCGTGAGAGCAAACGTTACCTCGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTATTGAAGAGTAA 2421 0.4754 MANHPLTHSHSFRERFDETLTGHRNEILALLSRLEAKGKGILQHHQVVAEFEEIPEESRKKLQDGVFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVNVHMLVVDELRPAEYLRFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMQPLLEFLRLHSYKGKTMMLNDKVQSLDSLQHVLRKAEEYLISVAPETPYSEFENRFREIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLERVYDTEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVALELAKELQAKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDPFDPKFNIVSPGADMGIYFPYTETERRLTEFHSDIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDHAAEILVEFFEKSKADPSHWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLERRESKRYLEMFYALKYRKLAESVPLAIEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0624 806 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Gso9g0624 806 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Gso9g0624 806 Gene3D - 146 275 - -
Gso9g0624 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Gso9g0624 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Gso9g0624 806 Pfam Glycosyl transferases group 1 564 738 IPR001296 GO:0016757
Gso9g0624 806 Gene3D - 25 145 - -
Gso9g0624 806 Pfam Sucrose synthase 9 553 IPR000368 GO:0005985|GO:0016157
Gso9g0624 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Gso9g0624 806 PANTHER SUCROSE SYNTHASE 1 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0624 Gso-Chr9 7666308 7672498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0624 2 806 Glycosyltransferase AT3G43190 83.230 0.0 1419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0624 K00695 - gmx:100806761 1615.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1503 15 17953440 17959644 Gso9g0624 9 7666308 7672498 GST
Gso13g0839 13 22711995 22717418 Gso9g0624 9 7666308 7672498 PCT
Gso17g0377 17 3409171 3414653 Gso9g0624 9 7666308 7672498 PCT
Gso9g0624 9 7666308 7672498 Gso13g0839 13 22711995 22717418 PCT
Gso9g0624 9 7666308 7672498 Gso17g0377 17 3409171 3414653 PCT