Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0377 ATGGCCACTGATCGTTTGACCCGGGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTCACTGCCAACAGGAACGAAATTTTGGCCCTTCTGTCAAGGATCGAAGCTAAGGGCAAGGGGATCCTGCAACACCACCAGGTCATTGCTGAGTTTGAGGAAATCCCTGAGGAGAACAGGCAGAAGCTTACTGATGGTGCCTTTGGAGAAGTCTTGAGATCTACACAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTGTGGGAGTACCTGAAAGTGAATGTGCACGCTCTTGTTGTTGAGGAGTTGCAACCTGCTGAGTACCTTCACTTCAAGGAAGAACTTGTTGATGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAATGCAGCCTTCCCTCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAGTTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCACGACAAGGAGAGCTTGCACCCACTTTTGGAATTCCTCAGGCTTCACAGCGTCAAGGGAAAGACTTTGATGTTGAATGACAGAATTCAAAACCCAGATGCACTCCAACATGTTCTGAGGAAAGCTGAGGAGTATCTGGGCACAGTGCCTCCTGAAACTCCCTACTCAGAATTTGAGCACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACAACGCAGAGCGTGTTCTTGAGTCAATTCAACTTCTCTTGGATCTTCTTGAGGCCCCTGACCCTTGCACCCTTGAGACTTTCCTTGGAAGAATTCCTATGGTCTTCAATGTTGTCATTCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAGAACGAGATGCTCCATCGCATTAAGCAACAAGGATTGGACATTGTACCTCGTATTCTCATTATCACCCGTCTTCTCCCCGATGCAATCGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTTCGGAACCGAGCACTCCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGAATTGTTCGTCAGTGGATCTCAAGATTCGAAGTCTGGCCATACTTGGAAACTTACACTGAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATTGTCGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTGGCACATAAATTAGGAGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCCGAATCCGACATTTACTGGAAAAAATTGGAAGAGAGATACCACTTCTCTTGCCAATTCACAGCTGATCTATTTGCCATGAACCACACAGATTTCATTATCACCAGTACCTTCCAGGAGATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGTCTCACACAGCCTTTACCCTTCCTGGACTCTACCGTGTTGTGCACGGCATTGATGTCTTTGATCCAAAATTCAACATTGTCTCCCCTGGAGCTGATCAAACCATTTACTTCCCCCCCACCGAAACTAGCCGTAGGTTGACCTCCTTCCACCCCGAAATCGAAGAACTTCTTTACAGCTCTGTGGAGAATGAAGAACACATATGCGTGCTGAAGGACCGCAGCAAGCCGATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATCACAGGACTCGTGGAGTGGTACGGTAAGAACGCGAAGCTGAGGGAGTTGGTGAACCTTGTGGTTGTTGCCGGAGACAGGAGGAAGGAGTCGAAGGACTTGGAAGAGAAGGCCGAGATGAAGAAGATGTACGGCCTGATCGAGACCTACAAGTTGAACGGGCAATTCAGATGGATTTCGTCTCAGATGAACCGTGTGAGGAACGGAGAGCTGTACCGTGTGATCTGCGACACCAAGGGAGCTTTCGTGCAGCCGGCTATATACGAGGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTCGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGCAAGTCTGGCTTCCACATTGACCCTTACCATGGTGACCGTGCTGCTGATCTCCTTGTTGACTTCTTTGAGAAGTGCAAGCTTGACCCAACCCACTGGGAAACAATCTCAAAGGCTGGTCTCCAGCGTATTGAAGAGAAGTACACATGGCAAATTTACTCACAGAGGCTTCTCACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCGTGAGAGCCGCCGCTATCTCGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCCGAGTCTGTGCCCCTTGCTGTTGAGTAA 2418 0.4872 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLKVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAIGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRQWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPPTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWETISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0377 805 Gene3D - 146 275 - -
Gso17g0377 805 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Gso17g0377 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Gso17g0377 805 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Gso17g0377 805 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Gso17g0377 805 PANTHER SUCROSE SYNTHASE 1 805 - -
Gso17g0377 805 Gene3D - 25 145 - -
Gso17g0377 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Gso17g0377 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Gso17g0377 805 Pfam Glycosyl transferases group 1 564 736 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0377 Gso-Chr17 3409171 3414653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0377 6 805 Glycosyltransferase AT3G43190 85.250 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0377 K00695 - gmx:100788584 1624.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0377 17 3409171 3414653 Gso17g0377 17 3409171 3414653 ECH
Gso13g0839 13 22711995 22717418 Gso17g0377 17 3409171 3414653 GST
Gso17g0377 17 3409171 3414653 Gso15g1503 15 17953440 17959644 PCT
Gso17g0377 17 3409171 3414653 Gso9g0624 9 7666308 7672498 PCT
Gso15g1503 15 17953440 17959644 Gso17g0377 17 3409171 3414653 PCT
Gso9g0624 9 7666308 7672498 Gso17g0377 17 3409171 3414653 PCT