Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0543 ATGACCAACAACAACGACAACATCGCCGTGACAGATCTCACTTCCGCCCTCAATGAAGAGAATCGCGCCGACCTAGTCAATGCTCTCAAGAGCAAGATTCAGAGTCTGGCTGGGGCTCATTCTGATGTTCTGGAGACTCTATCCCCCAATGTCAGGAAGCGTGTTGAATCTCTTAGAGAGATTCAGGGTAAACATGATGAAATAGAGGCAGACTTCTTGAAGGAGAAAGAAGCTCTTGAAGCCAAGTACCAAAAATTGTATCAGCCATTGTACACAAAGCGCTATGAAATCGTAAACGGTGTTATTGAAGTGGAAGGGGCAGCAAATGAAACAACAGATGAATCAGAAGAGGATAAAGAGAAAGGAGTGCCTTCTTTTTGGCTCAATGCAATGAAAAATAATGACGTGTTAGCTGAAGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTTAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTCTTCTTTGATACCAATCCTTACTTTTCAAATACCATCTTGACAAAAACATATCATATGATTGATGAGGACGAACCTATATTGGAGAAAGCCATTGGGACGGAAATTGAATGGTACCCGGGAAAATGTTTGACTCAGAAGGTTTTGAAGAAAAAGCCTAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACCGAGAGCTGTGAAAGTTTCTTCAATTTTTTCAAACCACCAGAAGTCCCTGAGGATGATGTTGACATTGATGAAGATTTGGCCGAGGAACTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCAACAATAAGAGACAAAATTATCCCTCATGCTGTATCATGGTTTACTGGGGAGGCTGTTGAGGGAGACGAGTTTGAAGACCTGGAAGATGATGAGGATGGAGATGACGATGAGGATGATGAAGAGGAGGATGAGGACGAAGATGATGATGACGGCGATGAAGAGGAGGAAGACAGTAAGACTAAAAAGAAGAAGAGTGGAAGGGCACAGGCTGGTGATGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAA 1080 0.4259 MTNNNDNIAVTDLTSALNEENRADLVNALKSKIQSLAGAHSDVLETLSPNVRKRVESLREIQGKHDEIEADFLKEKEALEAKYQKLYQPLYTKRYEIVNGVIEVEGAANETTDESEEDKEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFSNTILTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTESCESFFNFFKPPEVPEDDVDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAVEGDEFEDLEDDEDGDDDEDDEEEDEDEDDDDGDEEEEDSKTKKKKSGRAQAGDGERPPECKQQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0543 359 MobiDBLite consensus disorder prediction 296 332 - -
Gso9g0543 359 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 359 - -
Gso9g0543 359 MobiDBLite consensus disorder prediction 295 359 - -
Gso9g0543 359 Gene3D - 45 104 - -
Gso9g0543 359 SUPERFAMILY NAP-like 30 293 IPR037231 -
Gso9g0543 359 MobiDBLite consensus disorder prediction 333 359 - -
Gso9g0543 359 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Gso9g0543 359 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 359 IPR002164 GO:0005634|GO:0006334
Gso9g0543 359 Gene3D Nucleosome assembly protein 118 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0543 Gso-Chr9 6143508 6147109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0543 K11279 - gmx:100783783 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1408 15 15542186 15545676 Gso9g0543 9 6143508 6147109 GST
Gso13g0762 13 21951338 21954583 Gso9g0543 9 6143508 6147109 PCT
Gso17g0452 17 4095059 4098331 Gso9g0543 9 6143508 6147109 PCT
Gso9g0543 9 6143508 6147109 Gso13g0762 13 21951338 21954583 PCT
Gso9g0543 9 6143508 6147109 Gso17g0452 17 4095059 4098331 PCT