Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0452 ATGAGCAACGACAAGGACACATTCAACGTCGCCGATCTCACTTCTGCTCTCAACGAGGACAATAGAGCAGACCTTGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCTGGACAACACTCGGATATTCTAGAGTCTCTGTCGCCCAATGTCCGAAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGCCAACATGATGAATTAGAGGCTAAATTTTTTGAAGAGAGAGCAGCTCTCGAGGCCAAATACCAAAAATTGTATCAACCACTTTACACAAAGCGGTACGAAATAGTAAATGGTACTACGGAAGTTGAAGAAGGGGCAGTGAAAGAAACAGCACCTGATAATGAAGAGGATCAAGAGAAAGGAGTGCCTGCATTTTGGCTTACTGCTATGAAAAACAATGAAGTGTTGGCTGAGGAGATTTCAGAGCGTGACGAAGGTGCTCTTAAGTATCTCAAAGATATCAAGTGGAGCAGGATAGAAAACCCTAAAGGATTCAAGCTTGACTTTTTCTTTGATACCAACCCTTATTTTACCAATTCTGTCTTGACAAAAACATATCATATGATTGATGAGGATGAACCAATATTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACCCAGGAAAATGTCTGACACAGAAGATTCTTAAGAAAAAACCTAAGAAGGGTTCGAAGAATGCTAAACCAATTACCAAAACTGAAAATTGTGAAAGCTTCTTCAATTTCTTCAACCCCCCGCAAGTTCCTGAAGATGATGAAGACATTGATGAAGATGTGGCTGAGGAACTTCAGAATCAGATGGAACAAGACTATGACATAGGGTCCACAATAAGAGACAAGATTATTCCCCATGCTGTATCATGGTTTACTGGGGAGGCCATTCAGGGGGACGAGTTTGGAGATCTGGAGGACGATGAGGATGATGAAGATATTGAAGAGGACGATGATGAAGATGAAGAGGACGATGACGATGATGATGATGACGATGATGATGAGGAAGAGAGCAAGACCAAAAAGAAGTCATCAGCACCTAAGAAGAGTGGAAGAGCACAACTTGGTGATGGCCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1113 0.4286 MSNDKDTFNVADLTSALNEDNRADLVNALKSKIQSLAGQHSDILESLSPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRYEIVNGTTEVEEGAVKETAPDNEEDQEKGVPAFWLTAMKNNEVLAEEISERDEGALKYLKDIKWSRIENPKGFKLDFFFDTNPYFTNSVLTKTYHMIDEDEPILEKAIGTEIQWHPGKCLTQKILKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDVAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTKKKSSAPKKSGRAQLGDGQQGERPPECKQQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0452 370 MobiDBLite consensus disorder prediction 295 370 - -
Gso17g0452 370 MobiDBLite consensus disorder prediction 300 335 - -
Gso17g0452 370 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 370 IPR002164 GO:0005634|GO:0006334
Gso17g0452 370 Gene3D Nucleosome assembly protein 119 295 - -
Gso17g0452 370 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 370 - -
Gso17g0452 370 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Gso17g0452 370 Gene3D - 45 104 - -
Gso17g0452 370 SUPERFAMILY NAP-like 30 294 IPR037231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0452 Gso-Chr17 4095059 4098331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0452 K11279 - gmx:100818687 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0452 17 4095059 4098331 Gso17g0452 17 4095059 4098331 ECH
Gso13g0762 13 21951338 21954583 Gso17g0452 17 4095059 4098331 GST
Gso17g0452 17 4095059 4098331 Gso15g1408 15 15542186 15545676 PCT
Gso17g0452 17 4095059 4098331 Gso9g0543 9 6143508 6147109 PCT
Gso15g1408 15 15542186 15545676 Gso17g0452 17 4095059 4098331 PCT
Gso9g0543 9 6143508 6147109 Gso17g0452 17 4095059 4098331 PCT