Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0533 ATGGTGGTGAAGAAGCCACGGATTGTGATAATTGGAGCAGGAATGGCAGGCCTAACTGCTGCCAACAAGCTCTACACTGCCACAGCCTCAAAGGACTTGTTTGAGCTGTGTGTTGTGGAGGGTGGAACAAGGATTGGTGGAAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGAGCAACATGGATCCATGGAATTGGTGGCAGCCCTATTCACAAGATTGCTCAAGAGATCCACTCACTCCACTCTGACCAACCTTGGGAGTGCATGGATGGCAACACTGTCACTGATGATGCCACCACTATCACCATTGCTGAAGGTGGCTTCCACCTCCACCACCCTTCCATTGTTGACCCCATCACAAAGCTTTTCAACACCCTCATGGAATACTCTCAAGGGAAGCTCAATGATACCACTTCAAAGGGTGGAAGTGAACTTGAAAGCTATCAAAAGTTGGCTGCTAAGGTTGCTTCTGTTTCTGCTTCTTCCAACAACAACAACAAGAACAACCTTAGTGTTGGTTCTTTTCTCAGACAAGGGCTTGAGGCATACCAGGTTTCAAAGGAGGAGCAAGAGGAGGTGAAAGGGTGTGGGAACTGGAGCAGGAAGTTGCTTGAAGAAGCAATCTTTGCAATGCATGAGAACAACCAGAGGACATATACTTCAGCTGATGACCTTTTCACACTGGACTATGGTGCTGAGAGTGAGTACATAATGTTCCCAGGTGAAGAAATCACTATTGCTAAAGGGTACTTGAGCATAATTGAGTACTTGGCTTCTGTGTTGCCACCTGGTTTGGTTCAGTTGGGTAAGAAAGTTACAAGGATTGAGTGGCAGCTTGATGATGAGAAGAGGAAGAAGGGTGGTGCTGTGGAAAATAATGGATGTTGCTCTTCTTCTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGCTCAGTTATGTATGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTGTTAAAAGCTGCTATTCTTGATGATGATGATGATGATTCGGGTATGTTCTATCCTCCTCTTCCCCCTTCCAAGACTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCCAACACATGGAGGATTGAAACAACATGAAAATGAACAATCCGACAAAGGGTTCCCTTTCTTGCAAATGGCTTTCCATTCACCTCAATCTGAAATGAGGAACAAGAAAATACCATGGTGGATGAGGAGGACAGCCACCCTTTTCCCCATCTACAACAATTCCAGTGTCCTCTTGTCATGGTTTGTAGGGGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATAAACGGTGTTTCATCCACAGTCTCATTCTTTCTACAGCATCACTCTCAGTGGCAAAAGGGTTCCACCAGTTGTAGTTCACATAAACTGTGCAATGGGAATGTGAACTCTGATGAGGGAAGATCTCACTACCTACAAAATGAAGTGAAGTTTAGTAAAGTCTTGAAGAGCAAATGGGGAACTGATCCATTGTTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATATAATGGCAGAGCCATTGCCAAAAGATAACAGCAGTTGTCAAGCTTCTTCTGCAGCTTCATCATCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGCGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTACCATTGTGTTGGGATTTATAACAACTAG 1803 0.4409 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTVTDDATTITIAEGGFHLHHPSIVDPITKLFNTLMEYSQGKLNDTTSKGGSELESYQKLAAKVASVSASSNNNNKNNLSVGSFLRQGLEAYQVSKEEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLFTLDYGAESEYIMFPGEEITIAKGYLSIIEYLASVLPPGLVQLGKKVTRIEWQLDDEKRKKGGAVENNGCCSSSSRPVKLHFCDGSVMYADHVIVTVSLGVLKAAILDDDDDDSGMFYPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGGLKQHENEQSDKGFPFLQMAFHSPQSEMRNKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSFFLQHHSQWQKGSTSCSSHKLCNGNVNSDEGRSHYLQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNSSCQASSAASSSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0533 600 Gene3D - 238 360 IPR036188 -
Gso9g0533 600 Gene3D - 529 587 IPR036188 -
Gso9g0533 600 Gene3D - 502 528 - -
Gso9g0533 600 Gene3D - 145 464 - -
Gso9g0533 600 SUPERFAMILY FAD-linked reductases, C-terminal domain 362 522 - -
Gso9g0533 600 Gene3D - 3 115 IPR036188 -
Gso9g0533 600 PANTHER FLAVIN MONOAMINE OXIDASE 1 596 - -
Gso9g0533 600 Pfam Flavin containing amine oxidoreductase 15 589 IPR002937 GO:0016491
Gso9g0533 600 SUPERFAMILY FAD/NAD(P)-binding domain 3 592 IPR036188 -
Gso9g0533 600 PANTHER POLYAMINE OXIDASE 5-RELATED 1 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0533 Gso-Chr9 5954886 5957501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0533 K12259 - gmx:100778778 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1393 15 15244247 15247046 Gso9g0533 9 5954886 5957501 GST
Gso13g0751 13 21825897 21828130 Gso9g0533 9 5954886 5957501 PCT
Gso17g0463 17 4178834 4180864 Gso9g0533 9 5954886 5957501 PCT
Gso9g0533 9 5954886 5957501 Gso13g0751 13 21825897 21828130 PCT
Gso9g0533 9 5954886 5957501 Gso17g0463 17 4178834 4180864 PCT