Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0463 ATGGTGGCGAAGAAGCCGCTAATTGTGATAATTGGAGCTGGAATGGCAGGGCTCACTGCTGCCAACAAGCTTCACAGTGTGAGTGCCTCAAAGGACTTGTTTGAGGTGTGTGTTGTTGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACATCAGAGTTTGGTGGTGACCGAATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATTGCTCAACAAATCCATGCACTTGACTCTGAGCAACCTTGGGAGTGCATGGATGGGAATGAGAATAAGGCCACCACAATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCTTCCCATGTTGACCCCATCACAAAGCTTTTCAACAATCTCATGGATCATGCTCAGAGAAAGATGCCAACAACAACAAAGGGTGACTGTGGAAACCTTAGTGTTGGCTCTTTTCTTAAACAAGGCCTTGATGCTTATTGTGGTTCATCAAAAGAGGAAGAGGAGCTCAAAGGGTTTGGAAAATGGAGCAAAAAGTTACTCGATGAAGCAATCTTTGCAGTTCATGAGAACACACAGAGGACTTACACATCTGCTGCTGATTTGTTCAATCTAGATTATGCAGCAGAAAGTGAATACCAAATGTTTCCAGGTGAGGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAATCTTTAGCATCTGTGCTACCTCCTGGTTTGGTTCAGTTGGGTAGAAAAGTCACAAGAATTGAATGGCAGCCGGAGAGACACGAGGCGATGAATTTGGAAAATGGAAGACCATGTTCTTCTAGGCCTGTGATGCTACATTTCTGTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACAGTTTCACTTGGAGTGTTGAAGGCTTCTATTCGTGATGATGATTCAGGTATGTTAATGTTTAATCCCCCTTTACCATCTTTCAAGGCCGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTGAGTGAGCCTCCACATGAACATTCCAAAGGGTTCCCCTTCTTGCAAATGGTTTTTCATTCACCTCAATCTGAGTTGAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCTACCCTTTGTCCAATTTACAACAATTCTAGTGTCCTCCTATCTTGGTTTGCTGGGGAAGAAGCACTGGCACTTGAGTCACTCAAAGATGAAGAGATCATTGAAGGGGTTTCAGACACAATTTCATGCTTCCTATCGAATTCACTTGAGTTTTGCAACGGGAATGTGAATTCTGAGAAGTATTCTCACGAATATAAGGTGAAATTCAGTAAGGTGTTAAAGAGCAAGTGGGGAACAGATCCATTGTTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCAAAATGCCTCACTTGTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTTAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACACTATTCACTGTGTTAA 1593 0.4319 MVAKKPLIVIIGAGMAGLTAANKLHSVSASKDLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQQIHALDSEQPWECMDGNENKATTIAEGGFVLNPSSHVDPITKLFNNLMDHAQRKMPTTTKGDCGNLSVGSFLKQGLDAYCGSSKEEEELKGFGKWSKKLLDEAIFAVHENTQRTYTSAADLFNLDYAAESEYQMFPGEEITIAKGYLSIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNLENGRPCSSRPVMLHFCDGSIMSADHVIVTVSLGVLKASIRDDDSGMLMFNPPLPSFKAEAISRLGFGVVNKLFMQLSEPPHEHSKGFPFLQMVFHSPQSELRHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKDEEIIEGVSDTISCFLSNSLEFCNGNVNSEKYSHEYKVKFSKVLKSKWGTDPLFLGSYSHVAVGSSGDDLDTMAEPLPKCLTCASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSLC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0463 530 Gene3D - 8 522 IPR036188 -
Gso17g0463 530 PANTHER POLYAMINE OXIDASE 5-RELATED 1 528 - -
Gso17g0463 530 Pfam Flavin containing amine oxidoreductase 15 524 IPR002937 GO:0016491
Gso17g0463 530 PANTHER FLAVIN MONOAMINE OXIDASE 1 528 - -
Gso17g0463 530 SUPERFAMILY FAD/NAD(P)-binding domain 4 527 IPR036188 -
Gso17g0463 530 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 464 - -
Gso17g0463 530 Gene3D - 94 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0463 Gso-Chr17 4178834 4180864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0463 K12259 - gmx:106796594 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0463 17 4178834 4180864 Gso17g0463 17 4178834 4180864 ECH
Gso13g0751 13 21825897 21828130 Gso17g0463 17 4178834 4180864 GST
Gso17g0463 17 4178834 4180864 Gso15g1393 15 15244247 15247046 PCT
Gso17g0463 17 4178834 4180864 Gso9g0533 9 5954886 5957501 PCT
Gso15g1393 15 15244247 15247046 Gso17g0463 17 4178834 4180864 PCT
Gso9g0533 9 5954886 5957501 Gso17g0463 17 4178834 4180864 PCT