Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1393 ATGGTGGTGAAGAAGCCACGGATTGTGATAATTGGAGCAGGAATGGCAGGTCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTGTTTGAGCTGTGTGTTGTGGAGGGTGGAACAAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGCATTGAGATGGGAGCTACATGGATCCATGGAATTGGTGGCAGCCCTATTCACAAGATTGCCCAAGAGATCCACTCACTCCACTCAGACCAACCTTGGGAGTGCATGGATGGCAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTTCACCTCCACCCTTCCATTGTTGACCCCATCACGAAGCTCTTCAACACCCTCATGGAATATTCTCAAGGTAAGAAGACCCTCACTGAGGCCACTTCAAAGGGTGCTGAACTTGAAAGCTATCACAAGCTGGCTGCTTTGGCTGCTAAGCTTGCTTCTGCTTCTGCTTCTGCTTACAACAACAACAACCTTAGTGTTGGTTCTTTCCTCAGACAAGGCCTTGAGGCATACCAGGTTTCAAAGGAGCAAGAGGAGGTGAAAGGGTGTGGGAACTGGAGCAGGAAGCTGCTTGAAGAAGCAATCTTTGCAATGCATGAGAACAACCAGAGGACATATACTTCAGCTGATGACCTTTTGACACTGGATTATGGTGCTGAGAGTGAGTACAGAATGTTCCCAGGTGAAGAAATCACTATTGCTAAAGGGTACTTGAGCATAATTGAGTCCTTGGCTTCTGTGTTGCCACCTGGTTTTGTCCAGTTAGGTAGGAAGGTCACAAGGATTGAGTGGCAGCTTGATGATGAGAAGAGGAAGGGTGCTGTGGAAAATGGATGTTGCTCTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGCTCAGTTATGTCTGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTGTTAAAAGCTGCTATTAGTGATGATGATGATGATTCAGGTATGTTCTGTCCTCCTCTTCCCCCTTCCAAGACTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCCAACACACGGAGAAGGGAAACATGGAAATGAACACTCTAACAAAGGGTTTCCTTTCTTGCAAATGGTTTTCCATTCACCTCAATCTGAAATGGGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCCACCCTTTTCCCCATCTACAACAATTCTAGTGTCCTCTTGTCATGGTTTGTGGGGGAGGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATAAATGGGGTTTCATCCACAGTCTCATGCTTTCTACAGCATTCTCAGTGGCAAAAGGGTTCCACCAGTTCACATAAATTGTGCAATGGGAATGTGAATTCTGAGGAGAGATCTCACCACCAAAATGAAGTGAAGTTCAGTAAAGTCATGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCAAAAGATAACAGTTGTCAACCTCCTGCAGCTTCATCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTACCATTGTGTTGGGATTTATAACAACTAG 1746 0.4553 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNTLMEYSQGKKTLTEATSKGAELESYHKLAALAAKLASASASAYNNNNLSVGSFLRQGLEAYQVSKEQEEVKGCGNWSRKLLEEAIFAMHENNQRTYTSADDLLTLDYGAESEYRMFPGEEITIAKGYLSIIESLASVLPPGFVQLGRKVTRIEWQLDDEKRKGAVENGCCSSRPVKLHFCDGSVMSADHVIVTVSLGVLKAAISDDDDDSGMFCPPLPPSKTEAISRLGFGVVNKLFMQLSPTHGEGKHGNEHSNKGFPFLQMVFHSPQSEMGHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKGSTSSHKLCNGNVNSEERSHHQNEVKFSKVMKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDNSCQPPAASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1393 581 Gene3D - 513 568 IPR036188 -
Gso15g1393 581 Gene3D - 234 350 IPR036188 -
Gso15g1393 581 Gene3D - 148 455 - -
Gso15g1393 581 Gene3D - 485 512 - -
Gso15g1393 581 PANTHER FLAVIN MONOAMINE OXIDASE 1 577 - -
Gso15g1393 581 Gene3D - 3 116 IPR036188 -
Gso15g1393 581 SUPERFAMILY FAD-linked reductases, C-terminal domain 352 506 - -
Gso15g1393 581 PANTHER POLYAMINE OXIDASE 5-RELATED 1 577 - -
Gso15g1393 581 SUPERFAMILY FAD/NAD(P)-binding domain 3 573 IPR036188 -
Gso15g1393 581 Pfam Flavin containing amine oxidoreductase 15 570 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1393 Gso-Chr15 15244247 15247046 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1393 K12259 - gmx:100783032 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1393 15 15244247 15247046 Gso9g0533 9 5954886 5957501 GST
Gso13g0751 13 21825897 21828130 Gso15g1393 15 15244247 15247046 PCT
Gso17g0463 17 4178834 4180864 Gso15g1393 15 15244247 15247046 PCT
Gso15g1393 15 15244247 15247046 Gso13g0751 13 21825897 21828130 PCT
Gso15g1393 15 15244247 15247046 Gso17g0463 17 4178834 4180864 PCT