Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0523 ATGATCAAAGGAAAAGACATTTATGAAGTTGTGGCGGCGCTTGTGCCTCTCTACCTTGCTTTGTTCTTAGCCTACGGCTCCGTCCGTTGGTTGAAGATCTTCACCCAGGAACAGTGCTCCGGCATAAGCCGTTTCGTGTCGGTGTTCGCTGTCCCCTTCCTCTCCTTCGACTTCATCTCATCCAACAACCCTTACACCATGAACTTGAGGTTCCTAGCCGCGGACTCTCTCCAAAAAATCGTGGTTTTGCTTGCACTTTTCCTATTCAACACTTTCACAAAATGGGGCAGCATTGACTGGTCCATCACCTTGTTCTCACTCATCACACTCCCCAACACACTCGTCATGGGGGACCCTCTTTTGAAGGCCATGTATGGAGAATTCACACACGCCCTCATGACACAAATCGTGGTCTTGCAAAGTGTCATTTGGTACACTCTTTTGTTGGTACTTTTTGAGTATAGAGGCGCCAAGCTTCTCATTTCAGAGCAATTTCCCGAGACTGCAGGTTCCATTGCAACCCTTAGGGTTGATTCAAGTGTTAGCTCTCTCAATGGTAGAGAGCCTTTGCATGCTGATGCAGAAGTTGGAGAAAATGGACAACTTCATGTGGTGGTGAGGAGCATGTCACGTTCTGTGTCCATGGCTTCTTCGTTCCACAAATCCTATTCAACTGGGGTTGAGATCTACCCTTTTCCTTCATCTAGAGAACAAACTAGTCTCCAAAGTTTTGGGGTACATGAGAGTAGGTTTTGGAGGAGCAAGAGTGATGGTGATGCGGTTTTTAACAGTGGTTTGGTTTCTTCATTTCCGTCTATAAAACCAGTGTTTCAAGGGTCTCGTAGTGGTGGCCAAACAAACAGAGATATGAGTAGTAGTGATGGTGCAACTAGTAATATGGGGTTACACATGTTTGGTTGGAGCCGGAGAGAATCGTCAACTTCTGAAGTTAACATGAAACATGCAGTGAATAGGGTTGCGCCTTCTGATCAATTGGCCGTGCATGAGCTTGAAGAAATTAGGGAAGGAATTGAACATCCTGTAATGGGGAGACGGAGGGAGTTGAGCATTGAAGAAGACGATGGAAACAAAAGACAACAAATGCCTCGTGTTAGTGTCATGATAAAGCTTATTCTCACTATGGTTTGGAGGAATCTCTTAAGAAACCCTAATGCCTGGGCAAGTGTTTTCGGCCTCGTTTGGTCTCTCATATTTTTCAGGTGGAACATTGCAATGCCAAAAATTGTAAGAAAATGCATTGATATAATATCTCATACCGGACTGGGAATGGCCATGTTCAGTCTAGGTTTGTTCATGGCATTACAACCCAAGATCATTACTTGTGGAAAAACTCGGGCTACAATTTCATTGGTAATTAGGTTCTTGATTGGTCCAGCAGTGATTCTTGCAACCTCCAAAGCTATGAGTATCCATGGAGTTCTTTTAAATGTTGCAATAGTTCAGGCTGCTCTTCCCCAGGGTATTGTTCCATTTGTATTCGCCAAAGAGTATAATCTCCACCCGGACATACTCAGCACAGCGGTTATCTTTGGAATGGTGGTTGCGTTGCCCGTAACAATAATCTACTACGTGGTTCTTGGAGTGTTATAA 1611 0.4451 MIKGKDIYEVVAALVPLYLALFLAYGSVRWLKIFTQEQCSGISRFVSVFAVPFLSFDFISSNNPYTMNLRFLAADSLQKIVVLLALFLFNTFTKWGSIDWSITLFSLITLPNTLVMGDPLLKAMYGEFTHALMTQIVVLQSVIWYTLLLVLFEYRGAKLLISEQFPETAGSIATLRVDSSVSSLNGREPLHADAEVGENGQLHVVVRSMSRSVSMASSFHKSYSTGVEIYPFPSSREQTSLQSFGVHESRFWRSKSDGDAVFNSGLVSSFPSIKPVFQGSRSGGQTNRDMSSSDGATSNMGLHMFGWSRRESSTSEVNMKHAVNRVAPSDQLAVHELEEIREGIEHPVMGRRRELSIEEDDGNKRQQMPRVSVMIKLILTMVWRNLLRNPNAWASVFGLVWSLIFFRWNIAMPKIVRKCIDIISHTGLGMAMFSLGLFMALQPKIITCGKTRATISLVIRFLIGPAVILATSKAMSIHGVLLNVAIVQAALPQGIVPFVFAKEYNLHPDILSTAVIFGMVVALPVTIIYYVVLGVL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0523 536 MobiDBLite consensus disorder prediction 277 296 - -
Gso9g0523 536 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 535 IPR033526 GO:0010315|GO:0010329
Gso9g0523 536 Pfam Membrane transport protein 10 530 IPR004776 GO:0016021|GO:0055085
Gso9g0523 536 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 535 - -
Gso9g0523 536 TIGRFAM 2a69: auxin efflux carrier 1 534 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0523 Gso-Chr9 5778849 5782603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0523 1 535 Organic Solute Cotransporters AT1G23080 46.463 2.46e-176 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0523 K13947 - gmx:100788935 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0737 13 21657939 21661344 Gso9g0523 9 5778849 5782603 PCT
Gso17g0480 17 4343294 4346400 Gso9g0523 9 5778849 5782603 PCT
Gso9g0523 9 5778849 5782603 Gso13g0737 13 21657939 21661344 PCT
Gso9g0523 9 5778849 5782603 Gso17g0480 17 4343294 4346400 PCT