Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0737 ATGATCACCGGTAAGGATATTTATGATGTTTTCGCGGCTATTGTGCCCCTCTACGTGGCTATGATATTAGCATATGGCTCAGTTCGGTGGTGGAAAATTTTCACACCTGATCAATGTTCTGGCATAAACCGCTTTGTTGCCGTGTTCGCAGTTCCACTTCTTTCCTTCCACTTCATCTCCTCCAATGACCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTCTCTTCAAAAAGTTGTCATTTTGGGTGCTCTTTTTCTATGGAACACCTTCACAAAACATGGTAGCCTAGACTGGACCATCACCCTCTTCTCACTTTCAACTCTTCCAAACACACTTGTTATGGGAATCCCTCTATTGAAGGCCATGTATGGGGACTTTTCAGGGAGCCTCATGGTCCAAATTGTGGTGTTGCAAAGTGTCATATGGTACACCTTCATGTTGTTCATGTTTGAATATAGAGGTGCAAAACTCCTCATCACAGAACAGTTCCCTGAGACTGCAGGCTCCATTACCTCCTTCAGGGTTGACTCAGATGTTGTCTCACTCAATGGTAGAGAGCCACTGCAAACAGATGCTGAGATAGGAGAAGATGGAAAACTTCACGTGGTGGTTAAAAGATCAGCAGCTTCTTCTATGATATCTTCCTTCAACAAGTCCCATTTAACTTCCATGACACCAAGAGCATCTAACCTCACTGGGGTTGAGATCTATTCTGTTCAGTCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTTAATCAAACAGATTTCTATGCCATGTTTGCAAGCAAGGCACCCAGTCCAAAACATGGCTACACGAACAGCTTCCAGAGTAATGGTGGCATTGGTGATGTTTACTCGTTGCAGTCTTCAAAAGGGGCAACGCCAAGGACTTCGAATTTTGAAGAGGAGATGTTGAAGATGCACAAGAAGAGAGGAGGGAGGAGCATGAGTGGCGAGTTGTTTAATGGTGGGTTGGTTTCTTCTAATTACCCGCCTCCGAATCCAATGTTTTCAGGGTCTACAAGTGCCGGTGGCCCCAAGAAGAAAGATAGCAGTGGTGGCGGTGCTGCTGCTGCACCTAACACTAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCATCACCAGTTTCTGAGGGGAATCTGAGACATGCAGTTAATAGAGCTGCCTCTACTGACTTTGGAACTGTCGATCCTTCTAAGGCTGTTCCACACGAAACTGTTGCCTCAAAAGCTGTTCATGAATTGATTGAGAACATGAGTCCTGGTCGTAGAGGGAACGGAGATCAGAGGGAGCTTGAAATGGATGAAGGAGCCAAATTTGCCATAAGTGGATCTCCATACACCACCTGCCAGAACCAGAAGAAGGTGGACATGGAAGATGGCAATAATGCAAACAAAAACCAACAGATGCCACCTGCAAGTGTCATGACAAGACTCATCCTCATCATGGTTTGGAGAAAACTCATAAGAAATCCTAATACTTACTCCAGTCTTTTGGGACTTACATGGTCTCTCATATCATTTAGGTGGCACATTGAAATGCCAACTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTGGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTACAACCCAAGATCATTGCCTGTGGAAAATCTGTGGCAGCATTTTCTATGGCTGTTAGGTTCTTGACAGGTCCAGCTGTGATTGCTGCAACTTCAATAGGCATTGGACTCCGTGGAGTTCTTTTGCATGTTGCAATTGTCCAGGCTGCACTTCCCCAAGGTATCGTTCCCTTTGTGTTCGCCAAAGAATACAATCTCCATGCAGATATACTTAGTACTGCGGTTATATTTGGGATGCTAATTGCATTGCCCATAACCATACTCTACTACGTGCTGCTTGGAGTCTAA 1929 0.4463 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTFMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNGGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLVSSNYPPPNPMFSGSTSAGGPKKKDSSGGGAAAAPNTNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKAVPHETVASKAVHELIENMSPGRRGNGDQRELEMDEGAKFAISGSPYTTCQNQKKVDMEDGNNANKNQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLTWSLISFRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGV* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0737 642 Pfam Membrane transport protein 10 637 IPR004776 GO:0016021|GO:0055085
Gso13g0737 642 TIGRFAM 2a69: auxin efflux carrier 1 641 IPR014024 -
Gso13g0737 642 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 642 IPR033526 GO:0010315|GO:0010329
Gso13g0737 642 MobiDBLite consensus disorder prediction 329 350 - -
Gso13g0737 642 MobiDBLite consensus disorder prediction 329 363 - -
Gso13g0737 642 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0737 Gso-Chr13 21657939 21661344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0737 102 642 Organic Solute Cotransporters AT5G57090 74.147 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0737 K13947 - gmx:100499638 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0737 13 21657939 21661344 Gso17g0480 17 4343294 4346400 GST
Gso13g0737 13 21657939 21661344 Gso9g0523 9 5778849 5782603 PCT
Gso9g0523 9 5778849 5782603 Gso13g0737 13 21657939 21661344 PCT