Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0485 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCAAAGTCCTCTTATGGGAAATTTTTCACTGGAGACTCCTATGTGATCTTAAAGACAACTGCCTCAAAAAGTGGTGCTCTGCGCCATGACATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCGGGTGCTGCAGCTATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTACAAGGCCATGAAACTGAAAAGTTTCTGTCTTATTTCAAACCATGTATTATCCCTCAAGAAGGTGGAGTTTCTTCTGGTTTCAAACATCCTGAGGCTGAAAAACATAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCCAGAGCTTCACTCAACCATGATGATATTTTTGTTCTGGATACCGAATCGAAAATTTTCCAATTTAATGGTTCCAATTCGTCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAAGGGAAATGTGAGGTAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGAAAAACAGCCAGCGATGATGATAAGCCTACTGATTCTCGCCCTCCAAAGCTGCTTTGTGTTGAAAAGGGTCAGGCAGAACCTGTTGAGACTGATTCTTTGAAAAGGGAATTACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTGTTTGTCTGGTTGGGAAGAAATACCTCCCTTGATGAAAGAAAAAGCGCAAGTGGAGTTGCAGATGAGATAGTCAGTGGCACTGATCAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGACAACTGATGTAACAGTATCTGAAGATGGCCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTAAATGTTAAGGGCTTGTTGAAAGCTGATCCAGTGAGGGAAGAACCCCAACCCCACATTGATTGCACAGGACATTTGCAGGTTTGGCATGTGAATGGTCAGGAGAAGATTCTTCTTCAAGCTTCTGATCAATCAAAATTTTATAGTGGAGATTGCTTCATCTTCCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATAGGAACGTGGATTGGAAAGAATAGTGTTGAGGAAGAACGAGCTTCAGCTAATTCATTGGCAAGTAAAATGGTTGAGTCAATGAAGTTTCTTGCTTCCCAGGCTCGTATATATGAAGGCAATGAACCAATTCAATTTCATTCTATCCTTCAAAGCTTCATTGTTTTTAAGGGTGGGATTAGTGAAGGATACAAGACTTACATTGCACAAAAGGAAATTCCTGATGATACATACAATGAGAATGGTGTTGCATTATTCCGCATCCAGGGCTCTGGACCAGACAATATGCAAGCCATACAAGTTGAACCAGTTGCATCTTCCTTGAATTCCTCTTACTGTTACATACTTCACAATGGGCCTGCTGTCTTTACTTGGTCTGGAAACTCTACAAGTGCAGAAAACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTTCCGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTCTTAGAGAGCCTGAAAGTGATCCTCACCTATTTTCTTGCCACTTCTCGAAAGGAAATTTAAAGGTGACCGAGGTATACAACTTCTCCCAGGATGATTTGATGACTGAAGACATTTTTGTCTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCCAAGAGTAGAATGCAGGCTCTATCAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGGAGTGAGCCACCTTTCTTCACACGCTTCTTTAAATGGGATTCTGCAAAAGCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTGACAATTGTGAAAAGTGGGGGTGCTCCAGTTTTGGATAAACCCAAACGGAGAACATCAGCATCTTATGGGGGAAGGTCGAGTAGTGTGCCAGATAAATCCTCCCAGCGTTCCTCTCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTGAGGGGGCGGTCTCCAGCCTTTAATGCTCTAGCAGCTAATTTTGAGAACCCTAATTCTAGGAACCTTTCAACCCCACCTCCAGTAATTAGAAAGCTGTATCCTAAATCTGTGACAACAGATTCTGCAATACTGGCGCCAAAATCTTCTGCCATAGCTGCACTTAGTTCTTCTTTTGAACAACCACCTTCAGCACGAGAAACCATGATACCTCGCTCACTTAAAGTGAGTCCAGTAATGCCCAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCTGTGAGCACCAGAGTGGAATCTCTTACCATACAGGAAGATGTGAAAGAGGATGAAGTTGAAGATGAGGAAGGTCTTGTGATTTACCCATATGAACGCCTTAAAATAATGTCCACAGATCCTGTACCAAATATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGTCCAAGGATGCCTTTTACAAGTTACCCAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAGTTATTCTGA 2892 0.4201 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVSSGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTASDDDKPTDSRPPKLLCVEKGQAEPVETDSLKRELLDTNKCYILDCGFEVFVWLGRNTSLDERKSASGVADEIVSGTDQLKPQIIRVIEGFETVMFRSKFDSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWHVNGQEKILLQASDQSKFYSGDCFIFQYTYPGEDKEDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARIYEGNEPIQFHSILQSFIVFKGGISEGYKTYIAQKEIPDDTYNENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTSAENQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREPESDPHLFSCHFSKGNLKVTEVYNFSQDDLMTEDIFVLDCHSEIFVWVGQQVDSKSRMQALSIGEKFLEHDFLLEKLSRVAPIYVVMEGSEPPFFTRFFKWDSAKAAMLGNSFQRKLTIVKSGGAPVLDKPKRRTSASYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPVIRKLYPKSVTTDSAILAPKSSAIAALSSSFEQPPSARETMIPRSLKVSPVMPKSNPEKNDKENSVSTRVESLTIQEDVKEDEVEDEEGLVIYPYERLKIMSTDPVPNIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMAVQLF* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0485 963 SMART VHP_1 928 963 IPR003128 GO:0003779|GO:0007010
Gso9g0485 963 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Gso9g0485 963 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Gso9g0485 963 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Gso9g0485 963 Pfam Gelsolin repeat 637 712 IPR007123 -
Gso9g0485 963 Pfam Gelsolin repeat 28 111 IPR007123 -
Gso9g0485 963 Pfam Gelsolin repeat 410 479 IPR007123 -
Gso9g0485 963 Pfam Gelsolin repeat 150 217 IPR007123 -
Gso9g0485 963 Pfam Gelsolin repeat 266 337 IPR007123 -
Gso9g0485 963 CDD gelsolin_S5_like 517 608 - -
Gso9g0485 963 CDD gelsolin_S2_like 138 223 - -
Gso9g0485 963 ProSiteProfiles Headpiece (HP) domain profile. 898 963 IPR003128 GO:0003779|GO:0007010
Gso9g0485 963 SUPERFAMILY Actin depolymerizing proteins 511 614 - -
Gso9g0485 963 SUPERFAMILY Actin depolymerizing proteins 129 244 - -
Gso9g0485 963 Pfam Villin headpiece domain 928 963 IPR003128 GO:0003779|GO:0007010
Gso9g0485 963 Gene3D Severin 517 612 IPR029006 -
Gso9g0485 963 PANTHER VILLIN 1 963 IPR007122 GO:0051015
Gso9g0485 963 SUPERFAMILY VHP, Villin headpiece domain 888 963 IPR036886 GO:0003779|GO:0007010
Gso9g0485 963 SMART VILL_6 19 117 IPR007122 GO:0051015
Gso9g0485 963 SMART VILL_6 622 719 IPR007122 GO:0051015
Gso9g0485 963 SMART VILL_6 137 234 IPR007122 GO:0051015
Gso9g0485 963 SMART VILL_6 392 489 IPR007122 GO:0051015
Gso9g0485 963 SMART VILL_6 519 606 IPR007122 GO:0051015
Gso9g0485 963 SMART VILL_6 254 344 IPR007122 GO:0051015
Gso9g0485 963 CDD gelsolin_S4_like 388 485 - -
Gso9g0485 963 Gene3D Villin headpiece domain 901 963 IPR036886 GO:0003779|GO:0007010
Gso9g0485 963 Gene3D Severin 7 132 IPR029006 -
Gso9g0485 963 Gene3D Severin 247 356 IPR029006 -
Gso9g0485 963 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Gso9g0485 963 PANTHER VILLIN-3-LIKE 1 963 - -
Gso9g0485 963 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Gso9g0485 963 CDD gelsolin_S3_like 254 343 - -
Gso9g0485 963 Gene3D Severin 613 732 IPR029006 -
Gso9g0485 963 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Gso9g0485 963 CDD gelsolin_S1_like 12 124 - -
Gso9g0485 963 Gene3D Severin 133 246 IPR029006 -
Gso9g0485 963 MobiDBLite consensus disorder prediction 846 882 - -
Gso9g0485 963 MobiDBLite consensus disorder prediction 754 778 - -
Gso9g0485 963 MobiDBLite consensus disorder prediction 741 784 - -
Gso9g0485 963 CDD gelsolin_S6_like 621 720 - -
Gso9g0485 963 Gene3D Severin 388 502 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0485 Gso-Chr9 5105756 5125958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0485 - - gmx:100809968 1880.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1344 15 14099590 14112842 Gso9g0485 9 5105756 5125958 GST
Gso9g0485 9 5105756 5125958 Gso13g0710 13 21325124 21334889 PCT
Gso9g0485 9 5105756 5125958 Gso17g0512 17 4666015 4679320 PCT