Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1344 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCAAAGTCGTCTTACGGGAAATTTTTCACTGGAGACTCCTATGTAATCTTAAAGACAACTGCATCAAAAAGTGGTGCTCTGCGCCATGACATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCCGGTGCTGCGGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTACAAGGCCATGAAACTGAAAAGTTTCTGTCTTATTTCAAACCATGTATTATCCCACAAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAGGCTGAAAAACATAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTAGAGCTTCACTCAACCATGATGATATTTTTGTTCTGGATACTGAATCAAAAATTTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCCAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAAGGGAAATGTGAGGTAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGAAAAACAGCCAGTGATGATGATAAGCCTACTGATTCTCGCCCTCCAAAGCTGCTTTGCTTTGAAAAGGGTCAGGCAGAACCTGTTGAGACTGATTCTTTGAAAAGGGAATTACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAATTGCAAGTGGAGTTGCAGATGAGTTAGTCAGCGGCACTGATCAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGATAACTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTAAATGTAAAGGGGTTGTTGAAAGCTGATCCAGTGAGGGAAGAACCCCAACCCCACATCGATTGCACAGGACATTTGCAGGTTTGGCGCGTGAATGGTCAGGAGAAGATTCTTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTTCATCTTTCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATAGGAACATGGATTGGCAAGAATAGTGTTGAGGAAGAACGAGCTTCAGCTAATTCATTGGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTGCTTCCCAGGCTCGTATATATGAAGGCAACGAACCAATTCAATTTCATTCTATCCTTCAAAGTTTCATTGTTTTTAAGGGTGGGCTTAGTGAAGGATATAAGACTTACATTGCACAAAAGGAAATTCCTGATGATACATACAATGAGAATGGTGTTGCATTATTCCGCATCCAGGGCTCTGGACCAGACAATATGCAAGCCATACAAGTTGAACCCGTTGCATCTTCCTTGAATTCCTCTTATTGTTACATACTTCATAATGGGCCTGCTGTCTTTACTTGGTCTGGAAACTCTACAAGTGCAGAAAACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTTCTGAATCTGAACAGTTTTGGGATTTTTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTCTTAGAGAGCCTGAAAGTGATCCTCACCTATTCTCTTGTCATTTCTCGAAAGGAAATTTAAAGGTGACAGAGGTATACAACTTCTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAGTTATCTCATGTAGCTCCAGTATATGTTGTCATGGAAGGGAGTGAGCCACCTTTCTTCACACGCTTCTTTAAATGGGATTCTGCAAAATCTTCAATGCTGGGAAACTCATTTCAAAGGAAGCTGACAATTGTGAAAAGTGGGGGTGCTCCAGTTTTGGATAAACCCAAACGGAGAACACCAGTATCTTATGGGGGAAGGTCGAGTAGTGTGCCAGATAAATCCTCCCAGCGTTCCTCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGAGTGAGGGGCCGGTCTCCAGCCTTTAATGCCCTAGCAGCTAATTTTGAGAACCCTAATGCTAGGAACCTTTCAACCCCGCCTCCAGTAATTAGAAAGCTGTATCCAAAATCTGTGACACCAGATTCTGCAATACTGGCGCCAAAATCTGCAGCCATAGCTGCACTTAGTTCTTCTTTTGAACAGCCACCTTCAGCACGAGAAACTATGATACCAAAGTCAATTAAAGTGAGTCCAGTAATGCCCAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCTGTGAGCACCAGAGTGGAATCTCTTACCATACAGGAAGAAGGTCTTGTGATTCACCCATATGAACGCCTTAAAATAACATCCACAGATCCTGTACCAAATATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGCGGAGTTCAAAGAGAAATTTGCGATGTCCAAGGATGCCTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAGTTATTCTGA 2862 0.4189 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTASDDDKPTDSRPPKLLCFEKGQAEPVETDSLKRELLDTNKCYILDCGFEVFVWMGRNTSLDERKIASGVADELVSGTDQLKPQIIRVIEGFETVMFRSKFDSWPQITDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCFIFQYTYPGEDKEDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARIYEGNEPIQFHSILQSFIVFKGGLSEGYKTYIAQKEIPDDTYNENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTSAENQELVERMLDLIKPNLQSKPQREGSESEQFWDFLGGKSEYPSQKILREPESDPHLFSCHFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEKLSHVAPVYVVMEGSEPPFFTRFFKWDSAKSSMLGNSFQRKLTIVKSGGAPVLDKPKRRTPVSYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVIRKLYPKSVTPDSAILAPKSAAIAALSSSFEQPPSARETMIPKSIKVSPVMPKSNPEKNDKENSVSTRVESLTIQEEGLVIHPYERLKITSTDPVPNIDVTKRETYLSSAEFKEKFAMSKDAFYKLPKWKQNKLKMAVQLF* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1344 953 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Gso15g1344 953 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Gso15g1344 953 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Gso15g1344 953 MobiDBLite consensus disorder prediction 741 783 - -
Gso15g1344 953 CDD gelsolin_S5_like 517 608 - -
Gso15g1344 953 Pfam Villin headpiece domain 918 953 IPR003128 GO:0003779|GO:0007010
Gso15g1344 953 CDD gelsolin_S2_like 138 223 - -
Gso15g1344 953 Pfam Gelsolin repeat 410 479 IPR007123 -
Gso15g1344 953 Pfam Gelsolin repeat 150 217 IPR007123 -
Gso15g1344 953 Pfam Gelsolin repeat 28 111 IPR007123 -
Gso15g1344 953 Pfam Gelsolin repeat 266 337 IPR007123 -
Gso15g1344 953 Pfam Gelsolin repeat 637 712 IPR007123 -
Gso15g1344 953 Gene3D Severin 613 734 IPR029006 -
Gso15g1344 953 Gene3D Severin 249 355 IPR029006 -
Gso15g1344 953 PANTHER VILLIN-4 1 953 - -
Gso15g1344 953 SMART VILL_6 19 117 IPR007122 GO:0051015
Gso15g1344 953 SMART VILL_6 392 489 IPR007122 GO:0051015
Gso15g1344 953 SMART VILL_6 137 234 IPR007122 GO:0051015
Gso15g1344 953 SMART VILL_6 519 606 IPR007122 GO:0051015
Gso15g1344 953 SMART VILL_6 254 344 IPR007122 GO:0051015
Gso15g1344 953 SMART VILL_6 622 719 IPR007122 GO:0051015
Gso15g1344 953 Gene3D Severin 388 502 IPR029006 -
Gso15g1344 953 PANTHER VILLIN 1 953 IPR007122 GO:0051015
Gso15g1344 953 Gene3D Villin headpiece domain 891 953 IPR036886 GO:0003779|GO:0007010
Gso15g1344 953 CDD gelsolin_S4_like 388 485 - -
Gso15g1344 953 MobiDBLite consensus disorder prediction 755 778 - -
Gso15g1344 953 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Gso15g1344 953 SMART VHP_1 918 953 IPR003128 GO:0003779|GO:0007010
Gso15g1344 953 Gene3D Severin 133 248 IPR029006 -
Gso15g1344 953 ProSiteProfiles Headpiece (HP) domain profile. 888 953 IPR003128 GO:0003779|GO:0007010
Gso15g1344 953 SUPERFAMILY VHP, Villin headpiece domain 885 953 IPR036886 GO:0003779|GO:0007010
Gso15g1344 953 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Gso15g1344 953 CDD gelsolin_S3_like 260 343 - -
Gso15g1344 953 SUPERFAMILY Actin depolymerizing proteins 511 614 - -
Gso15g1344 953 CDD gelsolin_S1_like 12 124 - -
Gso15g1344 953 MobiDBLite consensus disorder prediction 859 881 - -
Gso15g1344 953 Gene3D Severin 517 612 IPR029006 -
Gso15g1344 953 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Gso15g1344 953 Gene3D Severin 7 132 IPR029006 -
Gso15g1344 953 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Gso15g1344 953 CDD gelsolin_S6_like 621 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1344 Gso-Chr15 14099590 14112842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1344 - - gmx:100808499 1852.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1344 15 14099590 14112842 Gso9g0485 9 5105756 5125958 GST
Gso15g1344 15 14099590 14112842 Gso13g0710 13 21325124 21334889 PCT
Gso15g1344 15 14099590 14112842 Gso17g0512 17 4666015 4679320 PCT